Protein

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Genbank accession
XEN39255.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MKAGGTYPDILQGVSQKPAHRRRAGQTHEQINVLSDPVNGLVRRRGTRFAASQAVVTSAELRNMDVFDFMQEGKEYALLYRRDASASSSATFAFLYNKTDEIFIPLVYENSTWVNTLVSGGASSLAAIGSYVYIAGNTTIPSATSTNVWQEQTNIQRLAAWVRTGKYNTTYTVNLTRTDNTVLTVTFKTVTASYPGTLDTSDIPFYLPGGTEPDPAYQKHVNDRVNEYNSAVNEWIVTSAEQTRPEYIAEKLSDLLVDAGVAATYIKGGIIIDDTQFKDITVDDEGDGTTFYAAGQEITDATYAAKFHWHGKIIRVRPSGAGADETYYLRAELENGETLGYGSVDWYEAPGVECTIDNLVSQLYIYNGVGYIARNGAGLTSLAPGSGEHPDYGARVAGDGLTSPIPWFIDKPITMLSVFQDRLVVGAQNYVNASRAADYLNFWRGSAVTIEDSDPIEIFAHGSEGDVLRHATLYNGNLVIFGDRQQYGISGDSVFSPKNPLIKAFSANKDSVDAKAQTSGNYIFYAQYGSEGTSLHQMRVGALNGQQTVTDEMSNELDSWLSGTPLQITALTAPNLVMFRTREHPQDFYLYRYEDNKNNGQRIVDSWSKFQYHPALGEIIGVSSYKKNGLVFTARGSLVACDVFDPKGEPDSHACLDSWASFGTPTGLQTESASIAVNGTSPYFLLGCPYAQASDFLSQFDDLDAGAIEYGVVSEARVIPTNPFPRDQNGQAVLDGRMSLNKVTVDVENTAGMLALVTTRNNSVTTTDFEGRILGDSDNLIARQPVYRGQLNISVGREVRECTYEIRSKDWLPLRVTGLSWTGNVFNNVRRVS
Physico‐chemical
properties
protein length:833 AA
molecular weight: 91343,33060 Da
isoelectric point:4,94257
aromaticity:0,10324
hydropathy:-0,31068

Domains

Domains [InterPro]
DC_0058
STR
1–833
DC_0058
IPR058003
TTP
6–629
IPR058003 IPR058003
XEN39255.1
1 833
Architecture
STR
STR 1-833
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEN39255.1
1 833
Domain Start End Length (AA) Confidence
N-terminal 1 186 186 0,7885
Central domain 187 390 205 0,3469
C-terminal 391 833 442 0,2846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-186
Central
187-390
C-terminal
391-833

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage L13.2
[NCBI] 		3239040 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris
[NCBI] 		339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39255.1 [NCBI]
Genbank nucleotide accession
PQ093899 [NCBI]
CDS location
range 19833 -> 22334
strand +
CDS
ATGAAAGCAGGCGGAACCTATCCCGACATCCTTCAGGGTGTCAGTCAGAAACCGGCGCATCGGCGGCGGGCGGGCCAGACGCATGAGCAGATAAACGTGCTCTCCGATCCGGTGAACGGCCTCGTGCGCCGTCGTGGTACGCGGTTCGCTGCTTCCCAAGCTGTTGTCACCTCGGCCGAGCTGCGCAACATGGACGTGTTCGACTTCATGCAGGAGGGCAAGGAGTACGCGCTACTGTACCGGCGTGATGCTTCGGCATCCAGCAGTGCAACGTTCGCGTTCCTCTACAACAAGACGGATGAGATATTCATCCCTCTAGTCTACGAGAACAGCACGTGGGTCAACACGCTGGTCAGTGGCGGTGCATCGTCTCTCGCGGCTATCGGCAGCTACGTCTACATCGCAGGCAACACCACGATCCCGTCAGCCACCAGCACCAACGTGTGGCAGGAGCAGACGAACATCCAGCGCCTTGCCGCGTGGGTGCGCACCGGCAAGTACAACACCACGTACACGGTGAACCTGACGCGCACGGACAACACGGTGCTGACGGTTACGTTCAAGACGGTGACCGCATCTTACCCCGGCACGCTCGACACGAGCGACATTCCATTCTACCTGCCGGGTGGTACGGAGCCGGACCCAGCGTATCAGAAGCATGTCAACGACCGGGTGAACGAGTACAACTCCGCAGTCAACGAGTGGATCGTAACCAGCGCCGAGCAGACGCGCCCGGAATACATCGCCGAGAAGCTGTCGGATTTGCTGGTGGACGCAGGCGTGGCTGCTACCTACATAAAGGGTGGCATCATCATTGACGATACCCAGTTCAAGGACATCACGGTTGACGACGAGGGCGACGGCACGACCTTCTATGCCGCAGGGCAGGAGATTACCGACGCGACCTACGCTGCCAAATTCCACTGGCACGGCAAGATCATCCGAGTGCGCCCGAGCGGTGCAGGTGCGGACGAGACGTACTACCTGCGTGCCGAGTTGGAGAACGGCGAGACTTTGGGCTATGGTTCGGTGGATTGGTACGAAGCGCCCGGCGTAGAGTGCACCATCGACAACCTCGTGTCGCAGCTCTACATCTACAACGGCGTGGGCTACATCGCACGCAACGGTGCGGGCCTCACGTCTCTGGCTCCGGGCAGCGGCGAGCATCCGGATTACGGTGCGCGCGTTGCAGGCGACGGGCTGACCTCCCCGATCCCGTGGTTCATCGACAAGCCGATCACCATGCTGTCCGTCTTCCAAGACCGGCTGGTGGTTGGCGCACAGAACTACGTCAATGCGTCGCGGGCGGCGGACTACCTGAACTTCTGGCGCGGCTCGGCCGTGACCATCGAAGACAGCGACCCCATCGAAATCTTCGCGCATGGTAGCGAGGGCGACGTGCTCCGGCACGCAACGCTCTACAACGGCAACCTCGTGATCTTCGGTGACCGGCAGCAGTACGGCATCAGCGGCGACTCGGTGTTCAGTCCGAAGAACCCGCTTATCAAGGCGTTCAGTGCGAACAAGGATTCGGTGGACGCGAAGGCGCAGACCTCGGGCAACTACATCTTCTATGCGCAGTACGGCAGCGAAGGCACGAGCCTGCATCAGATGCGCGTCGGTGCGCTCAATGGTCAGCAGACGGTGACAGATGAAATGTCCAACGAGCTGGACTCGTGGCTGTCCGGCACACCGTTGCAGATCACCGCGCTCACTGCTCCGAACCTCGTGATGTTCCGAACACGAGAGCACCCGCAGGACTTCTACCTGTACCGGTACGAGGACAACAAGAACAACGGGCAGCGCATCGTTGACTCGTGGTCGAAGTTCCAGTACCACCCGGCGCTAGGCGAAATCATCGGCGTCAGCAGCTACAAGAAGAACGGCCTCGTGTTCACTGCACGCGGGTCGCTGGTGGCGTGCGACGTGTTCGACCCGAAGGGCGAGCCGGACTCGCATGCGTGCCTCGACAGTTGGGCAAGTTTTGGTACACCTACAGGCTTACAGACCGAGAGCGCGAGCATCGCCGTTAACGGCACTAGCCCTTACTTCCTGTTGGGATGTCCATACGCTCAGGCGTCTGACTTCCTCAGCCAGTTCGATGACCTCGACGCTGGTGCCATTGAGTACGGCGTCGTGTCTGAGGCGAGGGTGATTCCGACTAATCCGTTCCCTCGGGATCAGAACGGTCAGGCTGTACTCGACGGCCGTATGTCCCTGAACAAGGTGACAGTGGATGTGGAGAACACGGCAGGTATGCTCGCCTTGGTTACCACCCGAAACAACAGCGTAACCACCACGGACTTCGAGGGCCGCATCCTCGGCGACTCCGACAACCTGATCGCGAGGCAACCGGTGTACAGGGGGCAGCTGAACATCAGCGTAGGACGTGAGGTGCGTGAGTGCACCTACGAGATTCGCAGCAAGGATTGGCTCCCGCTTCGGGTGACTGGCCTGAGCTGGACGGGTAATGTATTTAACAACGTTAGGCGCGTATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2dcd642a37337268a94f127e7325d440de62ee8a6b48cbd8d3f241a8c678201
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2910
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50