Protein

View in Explore
Genbank accession
WEU70613.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSLQFTQITDKHTLKDLTTQVNNIGLELTKSDNIFEVTDDLTTDINKSQKVKLTNDSGGAKRPNSISFLHDIKEPGYYYIHQSVLQRVPDRPTVAPRDALLVVYPVYTTGTAVIVQQLYTISFSDTELSSVYRYVNNTTASNWQHNVLLPGNKSRTYANMDVLDINTPGTHFIFRGSNLPVRAGSGLISVVSSEYYGKVFIYVDNETNKIYTSNSNGSGTLNWKSQIEVKDLKPFLLSDVDDNLAVKGTNIGIKVSDNKSFGNFIQDYVTRTNQHVLTFYCQGGVVGNPAGSDSCRGLFISSASEDDFGYGVYYAISNGGRLYTGTVTNSSWNESQKYPIMKELWTGTHNFKDTNKKEQMTDSIDNYNYVEIYTRYRALQNTKGTDKAGTLCHKFYVDGDGIYVCSGSYVSGDPDRIGVEYYRVTLTISGDTWTIKDSAVNNNKNQYIKRVVGLSI
Physico‐chemical
properties
protein length:456 AA
molecular weight: 50935,12920 Da
isoelectric point:6,45841
aromaticity:0,10965
hydropathy:-0,44189

Domains

Domains [InterPro]
DC_1773
STR
10–246
DC_1773 IPR057110
DC_0448
STR
197–456
DC_0448
WEU70613.1
1 456
Architecture
STR
STR 10-456
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WEU70613.1
1 456
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,8246
Central domain 231 429 200 0,0347
C-terminal 430 456 26 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-429
C-terminal
430-456

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SepM_BE25
[NCBI] 		3028900 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEU70613.1 [NCBI]
Genbank nucleotide accession
OQ355703.1 [NCBI]
CDS location
range 74347 -> 75717
strand +
CDS
ATGTCCTTACAATTTACACAAATAACAGATAAACATACATTGAAAGACTTAACAACTCAAGTTAATAATATTGGGCTTGAGTTAACTAAGTCAGACAATATATTTGAAGTAACTGATGACTTAACCACAGACATTAATAAGTCACAGAAAGTTAAATTAACTAATGATTCAGGTGGAGCTAAAAGACCTAATAGTATTAGTTTCCTTCATGATATTAAAGAACCTGGATATTATTATATCCATCAAAGTGTACTACAAAGAGTTCCTGACAGACCTACAGTAGCACCTCGTGATGCACTTTTAGTTGTATACCCAGTATATACAACAGGTACAGCTGTAATTGTACAGCAGTTATATACTATTAGTTTCTCTGATACAGAATTAAGTTCGGTGTATAGATATGTTAATAATACAACAGCTTCTAACTGGCAACATAATGTGTTACTCCCAGGAAACAAAAGTAGAACATACGCTAACATGGATGTATTAGATATTAATACACCAGGAACACATTTTATATTCAGAGGCTCTAATTTACCTGTAAGAGCTGGTTCTGGTTTAATATCAGTTGTATCATCAGAATATTATGGAAAAGTATTTATTTATGTTGACAATGAAACTAATAAGATATATACTAGTAATAGTAACGGTTCAGGTACATTAAATTGGAAATCACAAATAGAAGTAAAAGATTTAAAACCTTTTTTACTGTCCGATGTAGATGATAACTTAGCTGTTAAAGGTACTAACATAGGTATTAAAGTATCAGATAATAAATCTTTTGGTAACTTTATACAAGATTACGTAACAAGAACTAATCAGCATGTTTTAACATTTTATTGTCAAGGTGGCGTAGTAGGAAACCCTGCGGGGTCAGATTCTTGTAGAGGGTTATTTATTTCTAGTGCTTCAGAAGATGATTTTGGATATGGTGTATATTATGCTATATCTAATGGTGGAAGGTTATATACAGGTACTGTAACGAATAGTAGTTGGAATGAATCTCAAAAGTATCCTATAATGAAAGAGCTATGGACTGGAACACATAATTTTAAAGACACAAATAAAAAAGAACAAATGACAGATAGTATTGACAACTATAACTATGTAGAGATATATACTCGATACAGAGCATTACAGAACACAAAAGGTACGGATAAAGCAGGAACACTTTGCCACAAGTTTTATGTCGATGGTGACGGTATTTATGTATGCTCAGGCTCTTATGTATCGGGAGACCCTGATAGAATAGGTGTAGAATACTACAGAGTAACATTAACTATTTCAGGAGATACTTGGACTATTAAAGATAGTGCAGTAAATAATAATAAAAATCAATACATTAAACGAGTAGTTGGTTTATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
977eaab35e94fec72fccb62fc0771e6b3f9c250bfdae1751302dbe6bf55a7187
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7829
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophages targeting S. epidermidis from the skin of LVAD patients Pitton,M. 2021 — GenBank