Protein

View in Explore
Genbank accession
QYW02751.1 [GenBank]
Protein name
lectin domain protein
RBP type
TSP
Evidence DepoScope
Probability 0,73
Protein sequence
MAYLEGTCTTGGVATAGVKVYAFRTGQWGAPAVGTSDFEGKWRVEGLIDDVPYDVAFVHPEGEWEGKMSSRRMPIFDPFADPYWEDTTLLIHFDDIGGQQPINERGIPNLAIRGTGALIADAAPTPKFGTGCLNINNGATSAGYWFGSSNGTVAAGNPFYLAGTENFTVEGWFFCRSGVATNTYRDICILGANDKGVVINGSSQIVYYDGGIKIQGPAMTALYDKWVWLVVQRENGVTSMWLDGQKIGFYADAEIKNCFRLGSNVSNSEQFYGGLDEWRHTRAARYPGSPVSITVPTAPFNTGNPIRSDNFSVNRLWNYLQDTAAGTATWSINAGRLETNISSGASRYIRRDFASANMYVEGEFYTAQDCGLIWRYVDLNNFYQLTISDDQALANAKPNTVRIYKWVGGAASQVGADMPATITRGSANKIRVTMTGNTIDISVNGTSVGSVTDSSIAIKGQFGLFAAAGSGYDGMISVDNLKWDTVL
Physico‐chemical
properties
protein length:487 AA
molecular weight: 52726,24120 Da
isoelectric point:4,96457
aromaticity:0,11910
hydropathy:-0,17207

Domains

Domains [InterPro]
DC_0826
ATT
1–135
DC_0826 IPR013320 DC_0966
IPR013320
STR
138–285
IPR013320 G3DSA:2.60.120.560
IPR010496
Unmapped
327–464
IPR010496
QYW02751.1
1 487
Architecture
ATT
STR
RBD
ATT 1-135 | STR 138-285 | RBD 286-487
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW02751.1
1 487
Domain Start End Length (AA) Confidence
N-terminal 1 125 125 0,6128
Central domain 126 324 200 0,5170
C-terminal 325 487 162 0,9200
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-125
Central
126-324
C-terminal
325-487

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Marzo
[NCBI] 		2859652 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW02751.1 [NCBI]
Genbank nucleotide accession
MZ326868 [NCBI]
CDS location
range 127028 -> 128491
strand +
CDS
ATGGCATATCTTGAAGGAACATGTACAACTGGTGGCGTTGCAACCGCTGGCGTGAAGGTCTACGCCTTCAGAACTGGTCAATGGGGAGCGCCAGCTGTAGGTACCAGCGACTTTGAAGGCAAGTGGCGCGTCGAGGGTCTGATCGACGATGTACCATATGATGTCGCTTTCGTTCACCCAGAAGGTGAATGGGAAGGCAAGATGTCGAGCCGTCGCATGCCGATCTTTGATCCGTTCGCTGACCCATACTGGGAAGACACGACTCTCCTGATTCACTTCGATGATATCGGCGGTCAACAACCCATCAACGAGCGTGGGATTCCCAATCTAGCCATCCGTGGAACTGGAGCTCTCATTGCAGATGCGGCACCAACTCCTAAGTTTGGGACAGGTTGCCTAAACATCAACAACGGAGCCACATCAGCCGGCTATTGGTTTGGTTCGTCTAACGGAACTGTCGCCGCTGGCAATCCATTCTACCTGGCGGGAACCGAGAACTTCACCGTTGAGGGATGGTTCTTTTGCCGAAGTGGTGTTGCAACCAATACATACCGCGACATCTGTATTCTTGGCGCGAACGACAAAGGTGTCGTGATCAACGGTTCCAGCCAGATCGTCTACTATGATGGCGGTATCAAGATTCAAGGGCCCGCCATGACCGCTCTGTATGATAAGTGGGTGTGGCTGGTTGTCCAGAGAGAGAACGGTGTCACATCAATGTGGCTAGACGGTCAGAAGATCGGCTTCTACGCAGATGCAGAAATCAAGAATTGCTTCCGACTTGGCTCGAATGTGTCCAACAGTGAACAATTCTATGGTGGTCTTGACGAATGGCGCCACACACGCGCTGCTAGATATCCAGGATCGCCGGTATCAATCACAGTGCCAACTGCGCCATTCAACACTGGAAATCCGATCCGTTCGGATAATTTCTCAGTGAACAGATTGTGGAATTACCTCCAAGACACAGCTGCTGGTACAGCGACTTGGAGCATCAACGCAGGAAGATTGGAAACTAACATCTCATCTGGCGCCTCCAGATACATTAGACGAGATTTCGCCTCGGCAAATATGTATGTGGAAGGTGAATTCTACACAGCTCAAGACTGTGGGTTGATTTGGCGCTATGTCGACTTGAACAACTTCTACCAGCTTACGATATCTGATGATCAGGCTTTAGCAAATGCGAAACCCAACACCGTTCGGATCTATAAATGGGTGGGCGGTGCGGCTTCCCAAGTAGGGGCGGACATGCCGGCTACCATTACCAGAGGAAGCGCCAACAAGATCAGAGTGACGATGACAGGTAACACAATCGACATTAGTGTGAATGGAACTTCTGTCGGGTCCGTCACTGATTCCAGCATCGCCATCAAAGGTCAGTTTGGGCTTTTTGCTGCCGCTGGATCAGGTTATGATGGTATGATTTCTGTTGACAATCTTAAGTGGGACACAGTACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fed30dad14ee2354ee8fd966d02d372e90961eb10396d7ad326ee94de20a7ac5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8316
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Marzo Patel,J., Godoy,B., Clark,J., Liu,M. and Young,R. 2022-03-17 — GenBank