Protein
View in Explore- Genbank accession
- CAB4140584.1 [GenBank]
- Protein name
- COG4104 Uncharacterized conserved protein
- RBP type
-
TSP
- Protein sequence
-
MIPAARGFGGDRVFSLTGVGRQCRSPMVTTTGLGSPTVFINGFGAVRLGDPVGIHPTIGCAPDPSVLTTGSSSVFINGFPAGRIGDAYTADNIIISGSTNVFIGG
- Physico‐chemical
properties -
protein length: 105 AA molecular weight: 10543,87470 Da isoelectric point: 7,84698 aromaticity: 0,07619 hydropathy: 0,36095
Domains
Domains [InterPro]
G3DSA:2.60.200.60
STR
15–104
STR
15–104
G3DSA:2.60.200.60
STR
30–104
STR
30–104
IPR008727
STR
34–88
STR
34–88
1
105
Architecture
STR 15-104 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
105
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 41 | 41 | 0,5717 |
| Central domain | 42 | 94 | 54 | 0,1052 |
| C-terminal | 95 | 105 | 10 | 0,1816 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-41
1-41
Central
42-94
42-94
C-terminal
95-105
95-105
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
uncultured Caudovirales phage [NCBI] |
2100421 | Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAB4140584.1
[NCBI]
Genbank nucleotide accession
LR796380
[NCBI]
CDS location
range 23020 -> 23337
strand -
strand -
CDS
ATGATACCAGCGGCCAGGGGATTTGGCGGGGATAGAGTCTTTTCGCTTACGGGTGTTGGTCGCCAATGTCGAAGCCCGATGGTTACAACGACGGGATTAGGCTCTCCAACAGTCTTTATAAATGGTTTTGGTGCTGTACGACTAGGTGACCCCGTGGGTATACACCCAACAATTGGATGTGCACCTGACCCCTCGGTACTGACAACTGGATCATCTTCTGTCTTCATAAACGGGTTTCCTGCGGGAAGAATTGGTGATGCATACACAGCAGACAACATAATAATTTCAGGATCGACAAACGTTTTCATTGGTGGGTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
b5e9bbe62511dde4bd89012b63756e92ce13517d490087008bad72511b67b7e0
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50