Protein

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Genbank accession

APD24519.1 [GenBank]

Protein name

PblB

RBP type

Evidence RBPdetect2

Probability 0,63

Protein sequence

MIYLTEGNTPLNEAYNDEIVHLGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKGKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIEYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSFYHEWYGLDVRKKITKYTYSPMAKLLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFSKREKTITDAIELAKAKAEEVKQELSDTINQRFNSFDNGPLKEAKRKAEEALRNAGASSSLAQESKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELDGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAETEIAKQVEALSRTKNELDGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELASRIASVQAGSSRNYFRNSRSRTFTTGGQAVYDYRTFIVPDFWKNSDRFKRDYVRISFDVTFPVALVNDMPAMVHFSAHPWYAYRNLIFKGGTVERQHFEFTIDLSSSSEDYQTNNVFIRFGTNYGFPAGLQVVIENAMLSVGNYFPAYQPAYEDQEDRVSVVESNFKQRADSLDAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKANKSELTQTAEELASKIASVQASGRNLFLNSLFKQDIPKTGIWTTSTYTATIDSESKYLGHKALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTVWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRANSLEAGVNRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGTDNHISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVAKNASNGQNLLKGTKDFSGGWKNKGANWKKHAEKYKGVDVLFKNNSWNGVGQEIDAKIGEVYTFSLWMKSDWKNDTVNFYVNRNGSVEKGWGVPSETSVAITSEWKRYSFTFKITVDGFIFPRVERLNQNTNLYIAGLKLEKGSYATPYTEAPEDTDEAIRSVQSQLTGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILDAEAVTADKVRFDAAFIRKMTASDAFIDQLTSKRIFSTKVESVISSSTFLEAYQGRIGGFTIGRFAQGRGRWISGINQFSVGMGNGEGGSYNGENTAFWANWGHSWNSPGPNAWYVTTSGNMYCRNGADFHGKVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA

Physico‐chemical properties

protein length:	2105 AA
molecular weight:	235175,75250 Da
isoelectric point:	7,12917
aromaticity:	0,09216
hydropathy:	-0,55192

Domains

Domains [InterPro]

DC_1274
ATT
4–663

DC_1274 DC_0720 G3DSA:2.60.120.260 DC_0720

IPR007119
Unmapped
23–318

IPR007119 Coil Coil Coil Coil DC_0720 G3DSA:2.60.120.260 IPR030392

IPR010572
ENZ
143–326

IPR010572 IPR008979 IPR030392

DC_0976
RBD
2061–2105

DC_0976

APD24519.1

1 2105

Architecture

ATT

STR

RBD

ATT 4-663 | STR 691-1334 | STR 1426-2072 | RBD 2073-2105

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1274	ATT	DC_1274	4	663	Novel HMM	DC_1274	N-terminal	Low	Positional only	124 proteins / 124 hits
IPR007119	Unmapped	-	23	318	InterPro	Phage tail spike protein, N-terminal domain	-	-	-	-
IPR010572	ENZ	DC_0675	143	326	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
Coil	Unmapped	-	370	397	Coils	Coil	-	-	-	-
Coil	Unmapped	-	475	495	Coils	Coil	-	-	-	-
Coil	Unmapped	-	551	571	Coils	Coil	-	-	-	-
DC_0720	STR	DC_0720	691	917	Novel HMM	DC_0720	Central	Low	Positional only	121 proteins / 121 hits
Coil	Unmapped	-	859	879	Coils	Coil	-	-	-	-
DC_0720	STR	DC_0720	896	1334	Novel HMM	DC_0720	Central	Low	Positional only	121 proteins / 121 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1144	1313	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_0720	STR	DC_0720	1426	2072	Novel HMM	DC_0720	Central	Low	Positional only	121 proteins / 121 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1565	1714	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	1590	1714	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
IPR030392	CHP	DC_0088	2011	2064	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	2011	2104	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
DC_0976	RBD	DC_0976	2061	2105	Novel HMM	DC_0976	C-terminal	Low	Positional only	60 proteins / 60 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage IPP67 [NCBI]	1916203	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Streptococcus pneumoniae BS458 [NCBI]	512769	Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus pneumoniae

Coding sequence (CDS)

Genbank protein accession

APD24519.1 [NCBI]

Genbank nucleotide accession

KY065503 [NCBI]

CDS location

range 24919 -> 31236
strand +

CDS

ATGATTTATCTTACTGAAGGCAATACACCTTTAAATGAGGCCTACAATGATGAAATTGTCCATTTGGGGAACAATACCTATCAACTGACCTTTCGTTTTCCTACATCGGATCCCAAGTGGGAATTACTGAAAGAGGAAACTTTTCTGACTGCAGATGACCTGCATGGTGAGCAGGATTTTTATATTTTTGAGGTTGAAAAGCAACAAGGATATATTCAAGTCTATGCCAATCAGGTTATCAGCCTGTTAAATAACTACATCGTCAGCTCTATCGAGGTTGACCGTGTCAGTGGGACAAGGGTGTTGAGTGCTTTTGCTGGTAGTATTACCAGAGCCAATCCTTTTTCTTTCTTCTCTGATATTGATGATAGGCATACGCTCAATATCAAGGATAAGAATGCCATGGAGGTCTTGGCCAAAGGCAAGCATTCTATCCTTGGTCAGTGGGGCGGAGATATGGTGCGAAACGGCTACAATTTACGCTTGTTGAAGAATGGCGGTTCTGAAAATGAATCGCTTTTTATGTACAAGAAAAACTTGTCCAGCTACCAGCATAAGACCTCAACGAAGTCTTTAAAAACTCGGATAACCTTTAAAACGACTGTTAAGGGCGAGGGAGAAAATGCGGTTGACCATGATTATATGGTGGTGATTGACAGCCCCTTACTTGGGAACTACAGCCAAATCTACGAAGATGTGGTGGAAGTCAATGACCAAGACGTGACAGATGAGGCTAGCTTGATTGAATACGGTAAGCAGTATTTTCGGACAAGTATGTGCGACATGCTAGAAGATAACCTTGAAATCTCGGTTGTCGGTCAGAGTGATGTTGCGGTGCAGATGTTTGATGTGGTCAGTTTCTACCATGAGTGGTACGGTCTTGATGTTCGTAAGAAAATCACCAAATATACCTATTCGCCAATGGCAAAACTCCTAAAATCAATAGGTTTTGGAACCTTCCAGTCCAGTCTTGCAAATGCGATCGGTGGGATTGTAAATGATGCCGTTTTGAATGAAAGCCGAAATCTGCATCAGATTTTTGAAGAACGTTTGAAAAAGGAAATCGCCAACGCTGACCGTGCCTTTGACGCTGAATTTTCCAAGCGTGAGAAAACCATCACGGATGCCATCGAACTTGCCAAGGCCAAAGCGGAAGAAGTCAAGCAAGAACTGTCTGACACTATCAATCAGCGCTTTAATAGCTTTGACAACGGGCCATTGAAAGAAGCTAAGCGCAAGGCTGAGGAAGCTTTGCGAAATGCTGGCGCAAGTAGTTCTCTTGCTCAGGAATCCAAGCGGATTGGGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCGGGTGACTTGGACGCTCTGAAACGGACTATCGCGAATGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAAAATGAACTGGATGGCGCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGAGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCGGGTGACTTGGACGCTCTGAAACGGACTATCGCGAATGATATTCGACCGAAGCAAGCACAGGCTGAAACTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAAAATGAACTGGATGGCGTGAAGTCAGCGCAAGCGACGTATGAGGAGACGACGACTCGTAGACTGTCAGAACTGACCAACTTGGCCAATGGTAAAGCCAGCAAGTCAGAACTCACGCAGACAGCTGAGGAGCTGGCTAGTCGGATAGCGAGTGTGCAGGCAGGTAGTTCACGGAATTACTTCAGGAATTCACGTTCAAGAACGTTCACAACAGGAGGTCAAGCGGTATACGACTATCGAACATTCATAGTTCCTGATTTCTGGAAGAACAGTGACAGGTTCAAGCGTGATTATGTTCGCATATCTTTTGATGTGACTTTCCCTGTCGCCCTAGTAAATGACATGCCTGCTATGGTGCATTTTAGTGCTCATCCATGGTATGCCTACAGAAACTTAATTTTTAAAGGTGGCACTGTCGAACGCCAACATTTTGAGTTTACGATTGACTTGTCTAGTTCTTCTGAGGACTATCAGACTAATAATGTGTTCATTCGTTTTGGTACTAATTATGGATTTCCTGCTGGTCTGCAGGTCGTCATTGAGAACGCTATGTTATCGGTTGGTAATTATTTTCCAGCCTATCAACCAGCGTATGAAGACCAAGAAGACCGTGTCTCAGTAGTCGAATCCAACTTTAAGCAGCGTGCTGATTCACTCGACGCTGGTGTAAGCCGTCTGACTGAAGGGCTTAGAACTAAAGCCGATATCAGCTCACTCAATGTGACTGCTGAAAATATCCGGCAATCTGTGAAGAGCCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCCGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCCAACAAGTCAGAACTCACGCAGACAGCTGAGGAGCTGGCTAGTAAGATAGCGAGTGTGCAGGCATCCGGTCGAAATCTATTCTTGAACTCACTATTCAAGCAGGATATTCCAAAAACAGGAATTTGGACAACGAGTACATATACGGCTACTATCGATAGCGAAAGTAAGTATCTTGGACACAAGGCTCTTAAAATTATAGGTCTGAATCCATCTGGCCGTGATGGAGGTAATCCCAAGGTTACTTATCCAGCTCTGGGTCAATTCGGGAAAGTAATTCCCGGAAGTACGACTAATCAAGATGTAACCATTAGTTTTTATGCTAAGGCAAATAAAAATGGAATAATGCTGAGATCTCGATTAGGGAATATCGGATATAAAACTGGAAATGTGACATTGTCGACAGAAATTAAGCGATATGTTGTCCATATTCCAAAAGGTTGGACAAACGAATCCAAGCAGACCACAAATGAATGGTTGTTCAATTTCAACCAGGAAGGAACCGTTTGGATTTGGATGCCGAAGTTTGAAATAAGCGATGTAGATACTTCTTATTCAGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTTGAATCGACCTTCAAACAACGAGCCAACTCGCTCGAAGCTGGTGTGAATCGTCTGACTGAAGGCCTTAGAACCAAAGCCGATATCAGCTCACTCAATGTGACTGCTGAAAATATCCGGCAATCTGTGAAGAGTCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCAGATAAGACTCTAGTTGTATCTGAAGCCGGGAAATTGCGTGAAGAATTTTCAAAAATGAAGGTGGGAGGCCGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATTGAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCTACTTTAACGTTCAACCTTGAACCAGATTTCAGCTCAAGGTTGTACCAAAAAGTTACTTTTAGCGCTTGGATCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGGGTACAGAGTGGTCCAGATTATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTTGAAGGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCGACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATCACTGAAGCTAAGGCTACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGATTTATCAGCTATTCAGGAATATGTAAATAAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCACGAGACAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAGAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGTCTATCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAACAGTAATAAACAAGGCACAGATAATCATATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAATGCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGCGCGAAAAGTAGAGACTACTGACTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGAATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACTAATCAACTGTTTCAGGTTGAGGTGGCTAAAAATGCCAGCAATGGTCAAAATTTGTTGAAAGGCACAAAAGACTTCTCAGGGGGTTGGAAAAACAAGGGTGCAAATTGGAAAAAGCACGCTGAAAAATACAAAGGTGTTGATGTCCTATTTAAAAATAATTCGTGGAATGGCGTTGGACAAGAGATTGATGCAAAAATTGGTGAAGTCTATACATTCAGCTTATGGATGAAGAGCGACTGGAAGAATGATACAGTAAATTTCTATGTAAATAGAAATGGATCTGTTGAGAAAGGTTGGGGTGTTCCATCTGAAACATCGGTCGCTATAACAAGTGAATGGAAACGTTACTCATTTACCTTCAAAATTACTGTGGACGGCTTCATCTTTCCTCGTGTAGAACGACTTAATCAAAATACAAATCTATATATTGCAGGTCTTAAACTTGAAAAAGGATCGTATGCAACACCGTACACCGAAGCTCCTGAAGACACGGACGAAGCGATTCGCTCTGTTCAAAGCCAACTAACTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAATTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGACGCTGAAGCGGTCACGGCTGATAAAGTGAGATTTGATGCTGCGTTTATTAGGAAAATGACTGCAAGTGACGCTTTTATTGACCAACTGACATCTAAACGTATCTTCTCTACTAAGGTTGAGTCCGTCATTTCTAGTTCAACCTTCCTAGAAGCCTATCAAGGTCGAATCGGTGGATTCACTATTGGGCGTTTTGCTCAAGGAAGAGGTCGCTGGATTTCTGGTATCAACCAATTCTCAGTTGGCATGGGGAATGGTGAAGGAGGAAGCTATAATGGCGAAAATACCGCATTTTGGGCGAACTGGGGTCACAGTTGGAACTCTCCTGGCCCCAATGCTTGGTATGTAACAACATCAGGAAATATGTATTGCCGAAACGGAGCAGATTTCCACGGGAAGGTTGACTTTTCGAATTCATCGAGAGCAAACTTTTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTGCTTGGTGATGGCTGGAATCCCAAAGGAGGAAGGAATGCGGTTGTTTGGTGGAATCAGGTCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGACAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTGCATATTGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA

Genome Context

Tertiary structure

PDB ID

df70d0c2d98368d5408828226476fc9df52094cd53921aa674d83abedab26260

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6123

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence