Protein

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UniProt accession

A0A1L2JXP9 [UniProt]

Protein name

Upper baseplate protein

RBP type

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,94

Protein sequence

MTEHKITLSITEPNSNIGIIKLRHADVNSQAIVAQIVENGQPKNFEGLQPYFCLMAQEVTGQGVSEESVVSFDAKNGTLKYVASDNALQMVGHNEAYFSFRKQEGERWIEQFSTRTFKYIVEKSIYSQPFKDSNYWWTFKELNRIFNQYIEDGKTSWEEFVKSNREIIESIDPGGQVLSELIRSRKPEDAASAYPDLPTRLDKQIGKNTDFRSFESDKSFMTRVYNESAERGVNVKWFGAKGDGVTDDTVAIQSAINTGLSVFLPPGKYNVKELNGFSSGQIIQGISKVESWGGKNTQNITLLNGIGSADNYVIKNNVWGDGILPNAITVKNLSIEGNKKTNGILVGNSSTIEGVKIANCINGLSNIKVSNVMNCQINGCTNGVMNATDSKITNNFFYFNEVGINFDNSNDNSIVNNKIEWNGIGISLTKATYNLISNNIIDRNTTYGIYTANAVSTTISGNQFERNLTNHLYLHGSLFNISTNSLFRKNSEDNQSGIVAPDVAIFTKSIANSSITNNLVNGKMFNKTGTDYTSNLNIFANTIDGINPDNITVSIPETTAFHGKDTKIIIPLPNYFDGALNNPYNVEILSQKISFTTQSGNFTSNGGMIKSIYMSTSGIELTIFNGYNDDMKITGSINVRCPYPNLY

Physico‐chemical properties

protein length:	647 AA
molecular weight:	71583,16410 Da
isoelectric point:	5,62572
aromaticity:	0,09737
hydropathy:	-0,36662

Domains

Domains [InterPro]

G3DSA:2.60.40.3350
ATT
1–125

G3DSA:2.60.40.3350 G3DSA:6.10.250.1350 IPR011050 DC_1144

G3DSA:2.60.40.3350
ATT
1–126

G3DSA:2.60.40.3350 G3DSA:6.10.250.1350 IPR012334

IPR018913
ATT
3–148

IPR018913 IPR012334

IPR024535
ENZ
233–287

IPR024535 IPR006626 IPR039448

IPR006626
Unmapped
387–408

IPR006626 IPR006626 IPR006626

IPR022441
Unmapped
403–445

IPR022441

IPR022441
Unmapped
425–467

IPR022441

A0A1L2JXP9

1 647

Architecture

ATT

STR

RBD

ATT 1-192 | STR 229-560 | RBD 563-647

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.60.40.3350	ATT	G3DSA:2.60.40.3350	1	125	Merged direct domain	G3DSA:2.60.40.3350	N-terminal	Low	Positional only	41 proteins / 41 hits
G3DSA:2.60.40.3350	ATT	G3DSA:2.60.40.3350	1	126	Merged direct domain	G3DSA:2.60.40.3350	N-terminal	Low	Positional only	41 proteins / 41 hits
IPR018913	ATT	DC_0557	3	148	InterPro cluster	BppU, N-terminal	Central	Medium	Text match	333 proteins / 333 hits
G3DSA:6.10.250.1350	ATT	G3DSA:6.10.250.1350	125	192	Merged direct domain	G3DSA:6.10.250.1350	N-terminal	Low	Positional only	26 proteins / 26 hits
G3DSA:6.10.250.1350	ATT	G3DSA:6.10.250.1350	127	192	Merged direct domain	G3DSA:6.10.250.1350	N-terminal	Low	Positional only	26 proteins / 26 hits
IPR011050	STR	IPR011050	229	551	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	230	560	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR012334	STR	IPR012334	232	560	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR024535	ENZ	DC_0410	233	287	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits
IPR006626	Unmapped	-	325	348	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	385	535	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	387	408	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR022441	Unmapped	-	403	445	InterPro	Parallel beta-helix repeat-2	-	-	-	-
IPR006626	Unmapped	-	409	430	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR022441	Unmapped	-	425	467	InterPro	Parallel beta-helix repeat-2	-	-	-	-
IPR006626	Unmapped	-	431	453	InterPro	Parallel beta-helix repeat	-	-	-	-
DC_1144	RBD	DC_1144	563	647	Novel HMM	DC_1144	C-terminal	Low	Positional only	13 proteins / 13 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

A0A1L2JXP9

1 647

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	248	248	0,9956
Central domain	249	553	306	0,9925
C-terminal	554	647	93	0,9806

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-248

Central
249-553

C-terminal
554-647

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage CHPC926 [NCBI]	1913082	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Streptococcus thermophilus [NCBI]	1308	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

No CDS data available.

Genome Context

Gene Ontology

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID

bc730f347273dfef7a0ed60796aae399505f1beb60ac687ef4608fa01318a5ba

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7851

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence