Protein

View in Explore
Genbank accession
UGL60846.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPHLKAYDKYGNILAIGYNVELHEEVGSVIIPNLAPHTHYPQGEFYVSEINFKNNTLRSTNTALDKAIFLNFVVDSTITNNDIKTDKGNDSLSVPGSCSNLFVLNNSMNKNLSISSNAFNVISKDNIAYNLPKVLNGTAIPTTGSCRLGDIVVNTSRTLTSGSPEKWICTSDGVATNMKGTPNTDYTQGQIVYNGNYVYKAVASGTSGGTQPTHNNGVISDGSILWEFISTKDSF
Physico‐chemical
properties
protein length:235 AA
molecular weight: 25399,01410 Da
isoelectric point:5,91605
aromaticity:0,08511
hydropathy:-0,26851

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL60846.1
1 235
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0118
Central domain 11 200 191 0,6103
C-terminal 201 235 34 0,9975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-200
C-terminal
201-235

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauM-HM01
[NCBI] 		2894347 No lineage information
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL60846.1 [NCBI]
Genbank nucleotide accession
OL436246 [NCBI]
CDS location
range 135252 -> 135959
strand -
CDS
ATGCCACACTTAAAAGCATATGATAAATACGGTAATATATTGGCAATAGGTTACAATGTAGAGTTACATGAAGAAGTAGGGTCTGTCATTATTCCTAACTTAGCCCCTCATACACACTATCCACAAGGTGAATTTTACGTGTCAGAAATTAACTTTAAAAATAATACATTAAGAAGTACAAATACTGCTTTGGATAAAGCTATATTCTTAAATTTTGTTGTGGATAGTACAATTACTAATAATGATATAAAAACAGATAAAGGTAATGATTCATTAAGTGTCCCAGGTTCTTGTAGTAATTTATTCGTATTAAATAATAGTATGAATAAAAACTTAAGTATTTCTAGTAATGCATTTAATGTTATAAGTAAGGATAACATAGCTTATAATTTACCTAAAGTACTGAACGGTACTGCAATACCAACTACAGGAAGTTGTAGATTGGGAGATATTGTTGTTAATACTAGTAGAACCCTAACATCAGGTAGTCCTGAGAAATGGATATGTACTAGCGATGGAGTTGCTACTAATATGAAGGGGACACCTAATACGGATTATACACAAGGTCAAATTGTTTATAATGGGAATTATGTATATAAAGCAGTAGCTTCAGGTACAAGTGGTGGAACACAACCTACTCATAATAACGGTGTTATATCAGATGGCTCTATACTGTGGGAATTTATATCCACAAAAGATAGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ed1f801912e427203b958825face0ee228df0d8128e729b5fb65fadfd2278455
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Staphylococcus virus vB_SauM-HM01 Kwon,H., Park,S.Y. and Kim,J.H. 2016-07-06 — GenBank