Protein

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Genbank accession
YP_009850546.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MTNRLTFQFPWAQDGEVADPDLDTTNPSYVANRYADMGWEAEKPPNEWQNFLTQISDLKIMSLLFSGVAEFDSSVTYQTGAVSVLNGVVQIKVASGWEQILDMKTVDYLNDVAALKLIYDNHMAATNPHQDTVETLTDKSRTKEYLDAAFGSPTDPQTIVYHKLQQGRVHQETPEQVGTLPISGGTFTGPVSFLAGMGFATNNTVSMNGATGRLELRSGNRILSIDALGNVIWSIVGGEEYPVMTELNYSEFQIRWGNRFALPTPYLSMNLSASINDACSVRGWKISTTGTPAFHPMGGLKIDDNTVTFSGFDVSCPTTIVAFTRNASGTLGRGNSDAPSGGYTSLNTLLTNLGIVDAAYIVSITCYPTLTAYQKSMLVRP
Physico‐chemical
properties
protein length:381 AA
molecular weight: 41468,11010 Da
isoelectric point:4,77910
aromaticity:0,09449
hydropathy:-0,15538

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009850546.1
1 381
Domain Start End Length (AA) Confidence
N-terminal 1 301 301 0,6265
Central domain 302 370 70 0,1210
C-terminal 371 381 10 0,9840
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-301
Central
302-370
C-terminal
371-381

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Mangalitsa
[NCBI] 		2589658 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus mangalitsa
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009850546.1 [NCBI]
Genbank nucleotide accession
NC_048799.1 [NCBI]
CDS location
range 46226 -> 47371
strand +
CDS
ATGACTAATCGTTTAACTTTCCAATTTCCCTGGGCGCAAGATGGTGAAGTTGCTGACCCAGACTTAGACACAACCAACCCAAGTTACGTTGCAAACCGATATGCAGACATGGGATGGGAAGCTGAGAAGCCTCCAAACGAATGGCAGAACTTCTTAACACAGATTAGCGATTTAAAGATTATGTCTTTACTCTTCTCTGGTGTGGCAGAGTTTGATAGCAGTGTTACATATCAAACTGGTGCAGTGTCTGTCCTTAATGGTGTTGTGCAAATTAAGGTTGCCTCCGGTTGGGAACAAATCCTGGACATGAAGACTGTCGATTATTTAAATGATGTTGCAGCATTGAAACTCATTTATGATAATCACATGGCAGCAACCAACCCTCACCAAGATACAGTTGAGACACTTACAGATAAGAGTCGCACCAAAGAGTATCTGGATGCTGCATTCGGAAGTCCTACCGACCCACAAACAATTGTTTATCATAAATTGCAACAAGGTCGTGTTCACCAGGAAACTCCAGAGCAGGTTGGGACTCTTCCAATATCTGGTGGTACATTCACTGGTCCTGTGTCATTCCTTGCTGGGATGGGGTTTGCAACAAACAACACTGTCAGTATGAACGGTGCAACAGGTCGTTTGGAACTTCGTAGTGGTAATCGTATTCTGTCTATTGATGCTCTAGGAAATGTTATCTGGAGCATAGTTGGTGGTGAAGAATATCCCGTGATGACGGAGCTGAATTACTCAGAGTTTCAAATCCGTTGGGGAAACAGATTTGCACTCCCAACACCATACTTGAGCATGAACCTATCTGCCAGTATTAATGATGCTTGCTCTGTTCGTGGTTGGAAGATTTCAACAACGGGAACACCAGCATTTCACCCTATGGGTGGGTTGAAGATTGATGACAATACTGTAACCTTCTCCGGATTTGATGTTTCTTGTCCAACCACAATAGTGGCCTTTACAAGAAATGCTTCCGGTACTCTTGGGAGAGGTAACTCTGATGCTCCGTCTGGTGGGTATACAAGCCTTAACACACTCCTTACGAACCTTGGAATAGTTGATGCTGCTTACATCGTAAGTATCACTTGCTACCCAACGTTAACCGCTTATCAGAAATCAATGTTAGTGAGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b19ee4eb1fe674dc60aa748891072fba03703ca95397b3d6568863a840b122c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia coli Myophage Mangalitsa Atkison,C.L., Boeckman,J., Newkirk,H., Liu,M., Gill,J.J., Cahill,J. and Ramsey,J. 2019 31537680 GenBank