Protein

View in Explore
Genbank accession
WBF70026.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MANTTLTQFPAGQTQYKITFDYLARPFVVVTLVNSNDAALNRVLTAGNDYLFLNPTTIEILTSQAGFDILQIHRFTSTDLLVDFRDGSVLTATDLTNSELQAIHIAEEGRDQSTGLAKQYADQAVEAGKDAQDILNQIILLGKNGYTPVGSFENGGTVRLQNDVLQYGSGTATTHWRWEGTLPKVVPAGSTPTSAGGIGKGKWIDVTDATLRGQLAGTGGASMVKASDGRTVEQWLVQSDSASYRAKNMAKLAWVDYQVHNRGSIKSCFLGDSMTAGFDRTSSDVIPPQDGDWATRASMNYPYRFAGYLAEQSGCSSTVVMRAISGHTAKQAYEQAEWQTNPDCDIVFMMYAINDSGGVAGATLDIYMEYMEKLIRRYIDWGCAVVVQRPSGGGQGAGNPRWLHWAKRLQMVARVYGCPIFDAHEVMFYRHYAAVQSDGTHYNSMGYAIHGEKLASMLMAGGLLDTYRPVVNEITVWTGMMSDRVGWCDAMGNIGAFRSDGAFTRTKITGRLPGSTRVVTTFSFYLDAEAAHIYGKFVGKMNVIMTNSRWWNNNAQPYYQYADDQSHSFGMSLERTPKSPNDFSGASGSRKFIGRVIGRGWHTLTFFKALDGTDNTESFINSLTIQPIPLGLSTEQMWGQDEERRYKVVHTRKLPSPSGQGNNLPQATALNSFHMRVPQSVLGTGPGALCLPTPYFYNTIPATLRITDEKGTYIEFLVYKNGSSGLTWTGKVLKSTLAEASYPTLTAQLATAKQSVVRAAGQDGTNMPLENIYDFNGGLQPQNSSASDISWKGGIYFQFTLTWPGTAPTGYWNIELEGSDWFGNSESSFGAF
Physico‐chemical
properties
protein length:832 AA
molecular weight: 91192,27530 Da
isoelectric point:6,13517
aromaticity:0,10938
hydropathy:-0,28870

Domains

Domains [InterPro]
IPR005604
ATT
12–115
IPR005604 G3DSA:2.10.10.80 IPR036514
DC_0018
ATT
36–347
DC_0018 DC_0640
IPR040775
RBD
150–208
IPR040775 cd00229
IPR013830
ENZ
269–449
IPR013830
SSF52266
STR
269–458
SSF52266
WBF70026.1
1 832
Architecture
ATT
STR
RBD
ATT 12-347 | STR 348-459 | RBD 460-829 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF70026.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,9963
Central domain 243 493 252 0,6363
C-terminal 494 832 338 0,4312
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-493
C-terminal
494-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFP20
[NCBI] 		3017289 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF70026.1 [NCBI]
Genbank nucleotide accession
OQ031076.1 [NCBI]
CDS location
range 11698 -> 14196
strand +
CDS
ATGGCTAACACCACTTTGACTCAGTTCCCTGCTGGTCAGACCCAATATAAGATTACCTTCGACTATCTGGCGCGACCGTTCGTAGTGGTGACTTTGGTCAACAGTAACGATGCTGCCCTTAACCGAGTGCTGACCGCTGGTAACGACTATCTGTTCCTGAATCCTACCACTATCGAAATCCTTACGTCTCAGGCCGGGTTCGACATCCTTCAGATTCACCGCTTCACGTCTACAGACCTTCTGGTCGATTTTCGTGACGGTTCTGTCCTTACGGCTACAGACCTGACTAACTCAGAGCTTCAGGCCATTCACATCGCTGAAGAGGGCCGCGACCAGTCTACAGGTCTAGCCAAGCAGTACGCTGACCAAGCGGTAGAAGCTGGTAAGGACGCTCAGGACATCCTGAATCAGATTATCCTTCTGGGTAAGAATGGCTACACTCCTGTAGGCTCATTCGAGAACGGCGGAACTGTGCGTCTTCAGAACGATGTACTACAGTACGGGTCAGGAACCGCAACGACTCACTGGCGCTGGGAAGGCACTCTGCCTAAGGTAGTCCCCGCTGGTTCTACCCCAACGTCTGCTGGCGGTATCGGCAAGGGTAAGTGGATTGACGTAACTGATGCGACTTTGCGAGGACAACTGGCTGGGACTGGTGGTGCCTCTATGGTAAAAGCCTCAGATGGTCGTACCGTTGAGCAGTGGCTCGTTCAGTCTGACTCTGCGTCTTACCGTGCGAAGAACATGGCTAAGCTGGCGTGGGTAGACTATCAGGTCCATAACCGTGGGTCCATCAAGTCCTGCTTCTTGGGAGACTCAATGACTGCTGGTTTCGACCGGACGTCCTCTGACGTTATCCCACCTCAGGATGGGGACTGGGCGACCCGTGCGTCTATGAACTACCCCTACCGTTTTGCTGGCTACCTCGCTGAGCAGTCTGGGTGCAGCTCTACAGTAGTGATGAGGGCAATCTCAGGACATACCGCTAAGCAGGCTTATGAGCAGGCTGAATGGCAAACAAACCCGGATTGTGACATCGTGTTTATGATGTATGCGATTAATGACTCGGGTGGTGTTGCTGGTGCGACTCTGGACATTTACATGGAGTACATGGAGAAGCTGATTCGCCGTTATATTGACTGGGGATGTGCTGTTGTTGTCCAGCGTCCTTCTGGCGGCGGTCAGGGAGCTGGGAACCCAAGGTGGCTCCACTGGGCAAAGCGTTTACAGATGGTTGCCCGTGTGTATGGCTGTCCTATATTCGACGCGCATGAGGTAATGTTCTATCGTCATTACGCTGCCGTGCAGTCTGATGGGACCCACTACAACTCTATGGGCTACGCGATTCACGGAGAGAAACTGGCTTCCATGCTCATGGCTGGCGGACTTCTGGATACCTACCGTCCGGTGGTTAATGAGATTACCGTATGGACCGGGATGATGTCGGACCGAGTTGGCTGGTGTGATGCTATGGGGAACATTGGAGCCTTCCGTTCTGACGGAGCGTTCACCCGTACTAAGATAACTGGTCGTCTTCCGGGAAGCACACGAGTGGTCACGACCTTCAGTTTCTATCTGGATGCTGAAGCCGCGCACATCTACGGTAAGTTCGTAGGAAAGATGAACGTCATCATGACCAACAGTCGCTGGTGGAACAACAACGCTCAGCCGTACTACCAGTACGCTGACGACCAGTCACACTCCTTTGGCATGTCTCTGGAGCGAACCCCTAAGTCCCCTAACGACTTTTCAGGTGCTTCTGGTTCCCGCAAGTTCATCGGTCGAGTCATTGGGCGTGGTTGGCATACTCTGACGTTCTTCAAGGCTCTGGATGGGACGGATAACACCGAGTCTTTCATTAACAGTCTGACAATCCAGCCAATCCCGCTTGGGCTGTCAACCGAGCAGATGTGGGGGCAAGACGAGGAGCGACGCTATAAGGTTGTGCATACCCGCAAGCTGCCAAGCCCATCTGGACAGGGAAACAACCTGCCGCAGGCTACCGCACTGAATAGCTTCCATATGCGAGTGCCTCAAAGCGTTCTGGGGACTGGTCCGGGAGCATTATGCCTTCCGACGCCATACTTCTACAACACTATCCCTGCCACTCTCCGAATCACAGACGAGAAGGGAACGTACATTGAGTTCCTCGTGTACAAGAACGGTTCGTCTGGCCTGACTTGGACTGGTAAGGTACTTAAGTCAACACTGGCGGAAGCCTCCTATCCTACCCTTACAGCTCAGCTCGCAACGGCTAAGCAGTCTGTGGTCAGGGCTGCTGGTCAGGATGGTACGAATATGCCTCTGGAGAATATCTATGACTTCAATGGAGGACTTCAGCCTCAGAACAGCTCAGCGTCTGACATTTCGTGGAAAGGAGGTATCTACTTCCAGTTCACCCTTACGTGGCCGGGTACTGCACCAACTGGTTACTGGAACATCGAGCTTGAAGGCTCTGACTGGTTCGGTAACTCTGAGTCTTCCTTCGGCGCTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8ad854dfd7c38afe2d2ebfa0698f9bc4b190b47165f375d96f97ea4ef7c7eb2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6176
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50