Protein

View in Explore
Genbank accession
YP_009056078.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLPKIYGSKGGSKKPHTPVEQEDNLISLNKIKVLLAVADGEVDSSFSLKDVYLADVPVQNQDNSFNYEGVTAEFRSGTQSQDYIAGLDGAASEIQVSREINNDTPYIIAVNNSQLSAIRVKLFWPRLVKQEENGDLNGTTCEYAIDLSVNGSAYTEYTRGVANGKTTTGYDRSIRVNLPAEFSSALVRIRKLTPDSTSSTLVNGMQITTYQEVIDAKFRYPLTALVYVEFSSDLFPNGIPTIAIKKKWKLIRVPTNYNPETRTYSGAWNGTFKMAWSDNPAWVLYDLVVSQRYGLDQRELGVEIDKWGLYEAAQFCDQMVPDGKGGMEPRYTCNVVIQQKVEAYQLIRDICSIFRGLTFYDGEQIGIVVDRPRQPSYVFTNDNVVDGLFNRTFSSDKSLYTTANVQFDDEQNNYQQDVEPVFDLEATRRFGYNPVDLTAIGCVRRSEANRRGRWLLKTNLRSETVTFTTGLEGMIPMIGDVIAVNDQAWSSNYTLNLSGRIVEATGLQVFVPFAIDADPGDRILINKPDGSPEYRTIASVSADKLTLELNTAFSFTPQPDTVFAIDKQNLALQQYVVTGIQKANTDGEDSFQYSITAVQYDPNKYDEIDYGVNIDDRPTSIVDPDRILPPENITVTSYSKVVQGLSVETMVIGYEKVQYAKTYNVQWRKNNGNWINVPETANTEVDIEGIYAGIYDVRVRAVTDQKSVSTWSDITTVSLTGKIGEPSAPPVITASDDEVFGIRVKWGFPNDSADTAYTELQQVPDNGDGTYNPENASLLTLVPYPQYEYWHTTLPAGNVRWYRARIIDRIGNVSPWTDFVRGMASDDVSAIIGDIKVDIENSDGYRYLLQNAIDANTDIQNQAEAIIENALANDTDVRVMKRENGARKAEYRQAVSLIADETQARVDALTELKAQIDDEIVGQITTIETALATETEARASADTQLSSRLGENESALNQKLDSYATVEGVGVQYGVKLGIKYNGVEYGAGMSMELTGSGGNVRSQFIFDANRFAISNGISSGSGQWSLPFVVDNNQVFIQSAVIQDGSITNAKIGNRIQSNNYVAGSAGWAIDKSGSAELNNATVRGSLYASNGNFAFNGTNNTVVINNNGITVNLPNGGRVVVGVW
Physico‐chemical
properties
protein length:1128 AA
molecular weight: 124464,93120 Da
isoelectric point:4,61359
aromaticity:0,09309
hydropathy:-0,34131

Domains

Domains [InterPro]
DC_0014
STR
1–1128
DC_0014
IPR053171
Unmapped
7–886
IPR053171 Coil IPR015406
IPR055385
ATT
93–218
IPR055385 IPR032876 IPR013783 Coil
IPR003961
STR
631–719
IPR003961
IPR003961
STR
631–725
IPR003961
IPR036116
STR
651–719
IPR036116
YP_009056078.1
1 1128
Architecture
STR
ATT
STR
ATT
STR
STR 1-92 | ATT 93-218 | STR 219-341 | ATT 342-489 | STR 490-1128
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009056078.1
1 1128
Domain Start End Length (AA) Confidence
N-terminal 1 514 514 0,9396
Central domain 515 1060 547 0,0352
C-terminal 1061 1128 67 0,5885
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-514
Central
515-1060
C-terminal
1061-1128

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_AKS96
[NCBI] 		1416031 Uroviricota > Caudoviricetes > Drexlerviridae > Rogunavirus > Rogunavirus AKS96
Host Escherichia coli O157:H7
[NCBI] 		83334 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009056078.1 [NCBI]
Genbank nucleotide accession
NC_024789 [NCBI]
CDS location
range 17291 -> 20677
strand +
CDS
ATGGCCGATTTGCCAAAGATTTATGGAAGCAAGGGTGGTAGCAAGAAGCCGCACACGCCTGTAGAGCAAGAAGATAACCTGATTTCACTAAACAAGATTAAGGTGCTACTGGCTGTAGCTGATGGAGAGGTTGATTCTAGTTTCTCGCTCAAGGATGTTTACCTTGCTGACGTTCCGGTGCAAAACCAGGATAACTCATTCAACTATGAAGGTGTTACGGCAGAGTTTAGGTCTGGTACTCAGTCGCAGGATTACATCGCAGGACTAGATGGCGCAGCTTCAGAGATTCAGGTTAGTCGTGAAATCAATAATGACACACCTTATATCATCGCAGTCAACAACAGTCAGCTATCAGCAATTCGAGTCAAGCTGTTCTGGCCTCGACTCGTTAAGCAAGAAGAGAATGGAGATTTAAATGGCACAACATGTGAATATGCAATCGATTTATCAGTTAATGGCTCAGCGTACACTGAGTATACCAGAGGCGTGGCTAACGGTAAAACTACAACAGGTTACGACCGCAGTATCAGGGTTAACTTACCAGCCGAGTTTAGCAGCGCTCTTGTTCGTATTAGGAAGTTAACGCCAGACTCAACAAGTAGCACCCTGGTTAACGGGATGCAGATCACAACCTATCAGGAAGTAATCGATGCTAAATTCCGCTACCCTCTTACGGCACTTGTTTACGTGGAGTTCAGTTCTGACCTGTTCCCTAACGGGATCCCAACGATAGCCATTAAGAAAAAGTGGAAGCTTATCCGTGTGCCGACAAACTACAATCCAGAGACAAGAACTTATAGCGGAGCATGGAATGGAACCTTTAAAATGGCATGGTCTGACAACCCGGCCTGGGTTTTATATGACCTGGTGGTTAGCCAGCGTTACGGTTTAGATCAGCGAGAACTTGGTGTTGAGATTGATAAATGGGGTCTGTATGAAGCAGCGCAATTCTGCGACCAGATGGTTCCTGATGGTAAGGGTGGAATGGAGCCGCGATATACTTGTAACGTTGTCATTCAGCAGAAAGTGGAAGCGTATCAGCTTATTCGTGACATCTGTTCTATCTTCCGCGGTTTAACCTTCTATGATGGTGAGCAAATCGGGATTGTTGTAGACAGGCCGCGCCAGCCAAGCTATGTGTTCACTAATGATAACGTTGTTGATGGATTGTTTAACAGGACATTCTCTAGCGACAAGAGCCTTTACACGACAGCCAACGTTCAGTTTGATGACGAGCAGAACAACTACCAGCAGGACGTAGAGCCAGTATTCGACTTAGAAGCAACACGCCGATTTGGTTACAACCCTGTAGACTTGACTGCAATTGGCTGCGTAAGGCGAAGCGAGGCTAACCGCCGTGGTCGTTGGTTGCTGAAAACAAACCTTCGCAGTGAAACGGTAACGTTCACAACTGGCCTCGAAGGCATGATTCCTATGATTGGTGATGTAATTGCTGTTAATGACCAGGCATGGTCAAGCAACTACACATTAAACCTTTCTGGTCGAATTGTTGAAGCTACAGGTTTGCAGGTCTTCGTACCATTCGCTATTGATGCTGACCCTGGTGACAGGATTTTAATCAATAAGCCAGATGGAAGCCCAGAGTACAGGACTATCGCTTCAGTATCTGCAGATAAGTTGACACTTGAACTGAATACAGCATTCAGCTTCACGCCGCAGCCAGATACAGTATTTGCAATCGATAAGCAGAATCTGGCATTACAGCAGTATGTGGTGACCGGGATTCAAAAAGCTAACACTGACGGCGAGGACTCCTTCCAGTACAGCATCACGGCAGTTCAGTATGATCCGAACAAGTACGATGAGATTGACTACGGCGTAAACATCGATGACAGGCCAACAAGTATCGTTGACCCTGACAGGATTTTGCCACCTGAAAATATAACCGTTACTAGCTACAGCAAGGTAGTTCAGGGCTTAAGCGTTGAGACGATGGTTATTGGTTACGAAAAGGTGCAGTATGCGAAAACATACAACGTACAATGGCGTAAGAACAATGGTAACTGGATTAACGTACCAGAGACGGCTAACACCGAGGTTGATATTGAAGGAATTTACGCTGGCATCTACGACGTAAGGGTTCGTGCCGTAACTGACCAGAAATCAGTATCTACCTGGTCTGATATAACGACAGTTAGCCTGACCGGCAAGATTGGTGAACCATCTGCGCCGCCTGTAATTACCGCATCTGATGATGAGGTTTTCGGGATTAGAGTTAAGTGGGGTTTTCCTAATGATTCAGCCGATACTGCGTACACCGAGCTTCAGCAGGTTCCTGATAATGGTGACGGTACATACAATCCAGAAAACGCATCATTGCTTACACTGGTTCCGTATCCTCAATACGAATACTGGCACACAACCTTGCCAGCAGGCAACGTAAGGTGGTACAGGGCTAGGATTATTGACAGGATAGGTAACGTATCTCCGTGGACTGATTTTGTCAGAGGTATGGCTTCTGATGACGTGAGTGCAATCATTGGTGATATCAAGGTTGATATAGAAAACTCCGATGGGTACAGGTATCTTCTCCAGAACGCCATTGATGCAAACACTGACATCCAGAACCAGGCCGAAGCAATAATCGAGAACGCTCTGGCAAACGACACTGACGTACGCGTGATGAAGCGCGAGAATGGAGCCAGGAAAGCTGAATATCGCCAGGCAGTAAGTTTGATTGCTGATGAAACTCAAGCGCGTGTAGATGCTCTCACAGAGCTTAAAGCGCAGATTGATGATGAAATCGTGGGCCAGATTACAACTATCGAAACAGCTTTAGCTACTGAAACTGAAGCAAGGGCTAGTGCTGACACTCAATTGAGTTCAAGGCTTGGAGAGAATGAATCAGCCTTGAATCAGAAACTTGACTCTTACGCTACGGTCGAAGGGGTCGGTGTTCAGTACGGCGTAAAGCTAGGCATTAAGTACAATGGGGTTGAGTATGGCGCTGGTATGAGCATGGAGTTAACAGGTAGCGGCGGTAATGTTCGCAGTCAGTTCATTTTCGATGCTAACAGGTTCGCAATCAGCAACGGTATTAGTTCTGGATCCGGTCAGTGGTCACTGCCTTTCGTTGTGGATAATAACCAGGTGTTCATTCAGAGCGCGGTGATTCAGGATGGTTCAATTACTAACGCGAAGATTGGTAACAGGATTCAATCAAACAACTATGTTGCTGGTAGTGCTGGTTGGGCTATTGATAAGTCAGGGAGCGCAGAACTAAACAACGCGACAGTAAGGGGAAGCTTGTACGCAAGTAACGGTAACTTCGCCTTTAACGGAACCAACAATACTGTCGTAATAAACAATAACGGCATAACTGTTAATTTACCAAATGGAGGTAGGGTAGTGGTTGGAGTATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
91c4a53a4d8d94b9f318ced1cc9b90c9cad9b6645090c2a07581182fcf37b3e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7860
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50