Protein

View in Explore
Genbank accession
YP_010645194.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MYVSFYYDNSYHVFYVAKIVENDFSFQVTCNNTNLELAMEVARPLADSGGPKTIEWYLQNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKKFVIDIYHRPDKNHHGIGKARGDVVLYYQSGLKGVQVTSDKTQLFNAGVFTGADGVNLDSVEFEEKNELGQVEFYSRKGTSFVFAPISRERYPSTMNPDSADNWTRKDFQTEYKDVESLKAYALRTIKQYAYPLLTYTVDVQSSFLDNYKDINLGDTIKIVDNNFRGGLALEARVSEMIISFDNPANNSVVFTNFKKLDNKPSDALQQRIDEIVSKSLPYHVEIRTTNGTVFKNGVGHSTVKPILKQGDKIVNATYRFVIDGTIKYSGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFLNVSDGKQGPKGADGKTPYFHTAWSYSADGTDGFTTAYPNLNLLEGTKEFSGDWGFTRDWTNDGTFKGLTVKKRTYPWQGIFKTFTAPKDGKYTFSAYVKSSGDNVNIYRFVFLNGKDYWNAIKIIGNNFDWLRDSFTINLKANDTVIARYELSDKGSLWTAGHKWEEGSVATPWMPSANEVTTEDYPQYIGQYTNYMEVDSPNPQDYTWSLIRGNDGKQGPKGDRGIPGPKGEDGKTQYTHIAYADTISGSGFSQTDVNKPYIGMYQDFNAEDSKNPQDYRWSKWKGSDGKDGIPGPKGADGRTPYVHFAYADSADGRTGFSLTQTGSKRYLGVLTNFIKEDSTNPSDYTWNDTAGSVSVGGENLIINSAFPENLDNWGFWEPGLPNNNLHIAKHEFYYSGARNLFRLDNNGKEGVPAASKRFPVKRNTDYSFNIQTFATGNIKGLTIYFLGREANETDKAFTKVVHLKTHTGSPSVTQAVKWHLTFNSGDCDEGYIRIDNSGTTDGKTSMLFFAELDCYEATTDRAWQASSKDLEDQIDTKADDVLTQAQLNRLNEMNSIIKAELDAKASLDVLDQWKQAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMAASNEGLVVGKKDKSSSIMFNPNGRISMFSAGNEVMYISKGVINIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1130 AA
molecular weight: 126871,19490 Da
isoelectric point:5,27457
aromaticity:0,12035
hydropathy:-0,59195

Domains

Domains [InterPro]
DC_0109
STR
1–1130
DC_0109
IPR010572
ENZ
78–317
IPR010572 IPR008983 Coil
IPR008983
RBD
505–573
IPR008983
YP_010645194.1
1 1130
Architecture
STR
STR 1-1130
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC1033
[NCBI] 		2365010 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010645194.1 [NCBI]
Genbank nucleotide accession
NC_070659.1 [NCBI]
CDS location
range 16185 -> 19577
strand +
CDS
ATGTATGTGTCGTTTTACTACGATAATTCTTACCACGTTTTCTATGTGGCTAAGATTGTTGAGAATGATTTTAGTTTTCAAGTGACTTGTAATAATACCAACCTTGAATTGGCAATGGAAGTTGCACGACCACTTGCAGACAGTGGCGGTCCCAAAACTATTGAATGGTATCTTCAAAATCTTGAGTTGCTTGGTTTTGCAGGTCTGGAAATAGGTGTCAATGAAATTTCTGATAGAACAAGAACGCTTACTTTTGAATCTCAAAGTGGAACTAAACTAGAGCAACTTCATAGCTTGATGAATCAATTTGATGCAGAATTTATTTTCCGTACCGAATTAAACCGAGATGGTACTTTGAAAAAGTTTGTCATCGACATCTACCATCGTCCTGACAAAAACCATCACGGTATAGGTAAGGCTAGAGGAGACGTCGTTCTCTATTATCAAAGCGGCCTGAAAGGTGTTCAAGTTACAAGCGATAAAACACAACTGTTTAATGCTGGTGTTTTCACTGGTGCAGACGGGGTTAATCTTGATAGCGTTGAGTTTGAAGAAAAAAATGAGTTAGGACAAGTAGAGTTCTATTCTCGAAAGGGCACTAGCTTCGTTTTCGCCCCAATATCAAGAGAACGCTACCCATCTACCATGAATCCAGACAGCGCCGATAACTGGACACGTAAGGATTTTCAAACAGAATACAAGGACGTTGAATCCTTAAAAGCTTACGCCTTGCGTACTATCAAGCAGTATGCTTATCCACTATTGACTTACACAGTAGATGTTCAGTCTAGTTTTCTGGATAACTATAAAGACATCAATCTAGGTGATACCATCAAGATTGTGGATAACAATTTTAGAGGTGGCCTAGCCCTAGAAGCTCGTGTATCTGAAATGATAATCAGCTTTGACAATCCTGCGAATAATTCAGTAGTTTTCACCAACTTTAAAAAGTTGGATAATAAACCATCGGATGCCTTACAACAACGCATCGATGAGATAGTTTCTAAGTCATTGCCATATCATGTTGAGATAAGGACCACAAACGGTACAGTATTTAAAAACGGAGTTGGCCATTCTACTGTTAAACCCATCTTGAAACAAGGCGATAAAATCGTTAATGCAACTTATCGATTTGTGATTGATGGCACTATTAAATATTCGGGTATGACTTATGATATGGTAGCATCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTCTAAATGTTTCAGATGGGAAACAAGGTCCTAAAGGTGCCGATGGTAAAACACCTTATTTCCATACGGCATGGTCTTACAGTGCAGATGGTACCGATGGTTTCACGACTGCTTACCCTAATTTGAATTTGTTGGAAGGGACAAAAGAATTTAGTGGAGATTGGGGATTTACTCGGGATTGGACGAACGACGGAACCTTTAAAGGTTTAACTGTTAAGAAACGAACTTATCCATGGCAAGGTATATTCAAAACATTCACAGCACCTAAAGACGGAAAATACACTTTCTCAGCTTATGTTAAAAGTTCAGGTGATAATGTAAATATATATAGATTCGTTTTTTTAAATGGGAAAGATTATTGGAATGCTATTAAGATAATAGGAAACAATTTTGATTGGTTAAGAGATAGTTTCACTATAAATTTAAAAGCCAACGATACTGTCATTGCTAGATATGAATTATCGGATAAAGGTTCTTTATGGACTGCTGGTCATAAATGGGAAGAAGGTTCAGTAGCCACTCCATGGATGCCTTCAGCTAACGAAGTCACAACCGAAGACTATCCACAATACATTGGTCAGTACACAAACTATATGGAAGTAGATAGTCCTAATCCTCAAGACTACACATGGAGTTTGATTAGAGGAAACGATGGGAAACAAGGACCAAAAGGTGACCGTGGTATTCCCGGTCCTAAAGGAGAAGACGGTAAGACACAGTATACTCATATCGCTTACGCCGACACAATCTCAGGCAGTGGTTTTAGTCAAACAGATGTCAATAAACCATACATTGGAATGTACCAAGACTTCAATGCCGAAGATAGCAAAAATCCACAAGACTATCGTTGGTCTAAATGGAAGGGTAGCGATGGTAAAGATGGTATTCCTGGTCCTAAAGGTGCGGACGGACGAACGCCTTACGTGCACTTCGCTTACGCAGATAGTGCAGATGGTAGAACTGGTTTCAGTTTGACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGTACTAATCCATCGGACTATACGTGGAATGACACGGCTGGCAGTGTTTCGGTTGGCGGTGAGAACCTAATCATTAACTCGGCTTTTCCAGAGAATCTTGACAATTGGGGATTTTGGGAACCGGGATTGCCTAACAATAATCTTCATATAGCTAAACATGAATTTTATTACAGTGGTGCAAGAAATCTATTTAGACTAGATAATAACGGCAAGGAGGGAGTTCCTGCTGCATCAAAACGTTTTCCAGTCAAACGAAATACTGATTACTCATTTAATATTCAGACTTTCGCTACTGGTAATATCAAGGGCTTAACTATCTATTTTTTGGGTCGGGAGGCGAATGAAACTGACAAGGCATTTACTAAAGTCGTGCATCTCAAAACACATACAGGTTCACCGTCAGTAACACAAGCTGTTAAATGGCACTTAACGTTTAATTCTGGTGATTGTGATGAAGGTTACATCCGTATAGACAACAGTGGAACGACTGACGGTAAAACCTCTATGCTATTCTTCGCTGAGTTAGACTGCTATGAGGCTACTACTGATAGAGCTTGGCAAGCATCCTCTAAAGATTTGGAAGATCAGATAGATACCAAAGCTGACGATGTCCTAACACAAGCTCAACTCAACAGACTGAACGAAATGAACTCTATCATTAAAGCTGAATTGGATGCTAAAGCATCACTTGATGTACTTGATCAATGGAAGCAAGCTTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTGTTGGTAAAAAAGATAAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGTTCTCAGCTGGGAACGAGGTAATGTACATTTCAAAAGGTGTCATCAATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aca5895349dc959934c903d80bff81aee97eae61e09fbc0ec98b29926447edb7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7642
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank