Protein

View in Explore
Genbank accession
YP_007007684.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGNFIQPKGSTSTEIAREILSKTYSINYSEIDFIKQNLSVTGLKLLIDPNTQYIWGTISSSETGTISSWSIDSTGEIMTVLTTNGTLTLRKISVSTSTTTANSIYNFMTSDDIYNIKNVVGIEINVDYALQKAINSGLMSIYYPPSKGIYVHSNVCTLPSGFNMYGQSRKPYTVSNDASFNNCGTVIRLASGSPGIFVLSGRHTFDNIVFDGRNNTVGSMNATSQVSGCRFEKCGFYRWGIGLGRTSGYVATVYARGCNFSGNNTAMQDWIDSRAVDCTINAQVSRGIAMRTGANNNAWVGCRVEWNGTDGFYFYQSVGNVITGELIDRNGYAGITVADGASVSVTTCSIQRNGRISSNTNNGANILINDSGIILLNGNRFTSGVDDGGTGVLTPDYDIICAGGTGKILIASGNSFSGGNLGYMKEVTIANKVITGNYGLPDIINTGTYQKSSGLVKMGNTSTGTLPPAASNGTLTLSLSRPAMTQYMIPQKIVLEISARDTIGGRAEYFTVPLLCSWESTVPVINMISSKLDTYPDNVWGPSTNTPTGVQVSVSTTSDGSTITINLVSMDTRNRQIQAYIRGA
Physico‐chemical
properties
protein length:584 AA
molecular weight: 62450,41950 Da
isoelectric point:7,92789
aromaticity:0,08390
hydropathy:-0,09486

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
2–98
G3DSA:3.30.2020.50 IPR012334
G3DSA:3.30.2020.50
ATT
2–100
G3DSA:3.30.2020.50 IPR011050
IPR039448
ENZ
178–350
IPR039448
DC_0770
STR
255–473
DC_0770
YP_007007684.1
1 584
Architecture
ATT
STR
ATT 2-100 | STR 127-476 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007007684.1
1 584
Domain Start End Length (AA) Confidence
N-terminal 1 126 126 0,9531
Central domain 127 452 327 0,9905
C-terminal 453 584 131 0,9716
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-126
Central
127-452
C-terminal
453-584

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KleM_RaK2
[NCBI] 		1147094 Uroviricota > Caudoviricetes > Alcyoneusvirus >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007007684.1 [NCBI]
Genbank nucleotide accession
NC_019526 [NCBI]
CDS location
range 331851 -> 333605
strand -
CDS
ATGGGAAATTTTATACAACCTAAAGGTTCAACTTCTACTGAAATCGCCAGAGAAATTTTATCTAAAACTTATTCAATAAATTATTCTGAAATAGATTTTATAAAACAAAATCTTTCAGTTACTGGTTTAAAACTTCTTATTGATCCAAATACTCAATATATATGGGGGACTATTTCAAGTTCAGAAACTGGAACAATTTCATCATGGAGTATAGATAGTACTGGTGAAATTATGACTGTATTAACTACTAATGGCACGTTAACATTAAGAAAAATTTCTGTTTCTACTTCAACAACAACCGCAAATTCTATATATAATTTTATGACATCTGATGATATTTACAACATAAAAAATGTAGTTGGGATTGAAATTAATGTCGATTATGCTTTACAAAAAGCAATAAATTCTGGATTAATGTCAATTTATTATCCACCATCTAAAGGTATATATGTACATAGTAATGTATGTACATTACCATCAGGATTCAATATGTATGGTCAAAGTAGAAAACCATACACTGTTTCTAATGATGCATCATTTAATAATTGCGGGACTGTTATTAGATTAGCATCTGGTTCGCCTGGTATTTTTGTTCTTTCAGGGAGACATACTTTCGACAATATTGTATTTGATGGTAGAAACAACACAGTAGGTTCTATGAATGCTACATCACAAGTTTCTGGGTGTAGATTCGAAAAATGTGGATTTTATCGATGGGGTATTGGTTTAGGAAGAACTAGTGGGTATGTAGCAACCGTTTATGCTCGTGGTTGTAATTTTAGTGGTAATAATACAGCAATGCAAGACTGGATTGACTCGCGTGCAGTTGATTGTACAATAAATGCACAAGTCTCTCGTGGTATTGCGATGCGAACCGGAGCTAATAATAATGCATGGGTTGGGTGCCGAGTAGAATGGAATGGAACCGATGGTTTTTATTTTTATCAATCAGTAGGTAATGTAATTACTGGGGAATTGATTGACCGTAACGGATATGCAGGAATTACTGTTGCCGATGGTGCAAGTGTATCAGTTACAACCTGCTCAATACAACGAAACGGTAGAATATCCTCTAATACAAATAATGGGGCTAATATATTAATTAATGATTCTGGAATAATTTTATTAAATGGTAATAGATTTACTTCTGGTGTAGATGATGGTGGTACTGGTGTATTAACACCAGATTATGATATTATATGTGCTGGTGGTACTGGAAAAATCCTTATTGCTTCGGGAAATTCGTTTTCTGGTGGAAACTTAGGGTATATGAAAGAAGTGACTATAGCTAATAAAGTAATAACCGGAAACTATGGTTTACCTGATATAATTAATACAGGGACATATCAAAAATCATCTGGCTTGGTTAAAATGGGGAATACATCTACCGGAACATTACCCCCAGCAGCATCAAATGGAACATTAACATTATCATTAAGCAGACCAGCAATGACACAATATATGATTCCACAAAAAATAGTTCTTGAAATATCAGCAAGAGATACTATAGGTGGAAGAGCTGAATATTTCACAGTTCCTCTATTGTGTTCATGGGAAAGCACCGTACCCGTAATTAATATGATATCATCGAAATTAGATACATATCCAGACAATGTATGGGGTCCAAGTACAAATACACCTACTGGGGTTCAAGTATCTGTTAGTACAACATCTGATGGTTCTACTATTACTATCAACTTAGTATCTATGGATACAAGAAATAGACAAATACAAGCTTATATTAGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8455318fd2f44fcb13b122fa73616f37f89f1844e5bc88c0a5e5e947811b0d26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7404
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50