Protein

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UniProt accession
A0A0A0RP94 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGNIFRDNMYNDIDNPVEKIEVIGDKVDSYNDQINVLESVYINVKSFDAQGNNSTNDTKAIQDALYSLTSGQRLYFPKGTYLVTNLILPDVSFTIDAAPGAVIKKISGGSSAYLIASYNYLNNKNYVGAPVKVNNLTLDGDNLCDDVAILQTWNSVLDKVTVRNGARYGLHYTANTADGTLITSTAVNNRITNSWVHNNTVNNIHVTDTSRTKVSDMFIKDNYIYSSQIGVYLQTSAGTLFSGNHLYGHSDFDMQVSISSFAFQIVNNYFEGSIGSPKKVLYIQDFIANTSCIFASNTVAGEVRMYSGNAGSQFLSTGNNYRTVDGCIKNNWNIKVTVLSTGDRFESQRPLLAVDNNWALNASSNSQFIANGSTTNFFGDVRKLEGVITASNTILATVYGASAPATGTFSAGSICYNTAPVAGGKIGWICTAGGSPGTWKAFGAIDA
Physico‐chemical
properties
protein length:447 AA
molecular weight: 48269,13960 Da
isoelectric point:5,54842
aromaticity:0,10515
hydropathy:-0,12908

Domains

Domains [InterPro]
DC_0148
STR
6–447
DC_0148
IPR012334
STR
25–397
IPR012334
IPR011050
STR
39–326
IPR011050
IPR024535
ENZ
41–246
IPR024535
IPR006626
Unmapped
152–174
IPR006626 IPR006626 IPR006626
A0A0A0RP94
1 447
Architecture
STR
STR 6-447
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A0A0RP94
1 447
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,9516
Central domain 58 359 303 0,9843
C-terminal 360 447 87 0,8660
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-359
C-terminal
360-447

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Moonbeam
[NCBI] 		1540091 Uroviricota > Caudoviricetes > Herelleviridae > Moonbeamvirus > Moonbeamvirus moonbeam
Host Bacillus megaterium
[NCBI] 		1404 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIW03449.1 [NCBI]
Genbank nucleotide accession
KM236246 [NCBI]
CDS location
range 26631 -> 27974
strand -
CDS
TTGGGAAACATTTTCAGAGATAATATGTATAATGACATAGACAACCCTGTTGAAAAGATTGAGGTTATTGGGGACAAGGTGGACAGCTATAACGACCAAATTAACGTATTAGAAAGTGTTTACATAAATGTTAAGAGCTTTGATGCACAGGGAAATAACAGTACAAACGACACAAAAGCGATCCAGGATGCCTTGTATAGCCTTACATCAGGACAAAGGTTATATTTTCCTAAAGGTACCTATTTGGTCACTAACTTGATTCTGCCTGATGTTAGCTTTACTATCGACGCAGCACCAGGAGCAGTCATCAAGAAGATAAGTGGAGGTAGTTCTGCCTATCTCATCGCATCTTACAACTACTTAAATAACAAAAACTACGTAGGTGCTCCGGTTAAGGTTAATAACCTTACGCTCGATGGAGATAATTTGTGTGATGATGTAGCTATTTTACAAACATGGAACAGTGTTTTAGACAAAGTTACAGTAAGAAATGGTGCTCGCTACGGTCTTCATTACACTGCTAATACTGCCGATGGTACTTTAATTACTTCTACCGCAGTAAATAACCGAATCACTAACTCCTGGGTACATAACAATACAGTTAACAATATCCATGTAACAGATACTAGCCGAACAAAAGTTAGTGATATGTTTATTAAGGATAACTATATCTACAGTAGCCAAATTGGGGTATACTTACAAACATCTGCAGGTACTCTATTCTCAGGAAACCATTTATATGGTCATAGTGATTTTGACATGCAGGTTTCTATTTCTTCATTTGCCTTTCAAATTGTCAACAACTATTTCGAAGGGAGTATAGGGAGTCCTAAAAAAGTGCTGTATATTCAGGATTTTATTGCTAATACATCTTGTATTTTCGCTTCAAATACCGTAGCAGGGGAAGTACGTATGTATAGCGGTAACGCAGGGAGCCAGTTCCTATCTACAGGTAACAACTACCGCACAGTGGACGGCTGTATCAAGAACAACTGGAATATTAAGGTTACTGTGCTTAGCACCGGGGATCGCTTTGAGTCTCAACGCCCGTTATTAGCCGTAGACAACAACTGGGCATTAAATGCATCGTCCAATTCTCAGTTTATCGCTAATGGCTCTACGACAAACTTTTTCGGTGATGTTCGTAAGCTTGAAGGGGTTATTACAGCCTCTAATACCATCTTAGCCACTGTATACGGAGCCTCTGCTCCTGCAACAGGAACTTTCTCCGCAGGGTCAATTTGTTATAACACAGCTCCTGTAGCAGGGGGTAAGATAGGTTGGATTTGTACCGCAGGCGGGTCACCAGGTACTTGGAAAGCCTTTGGAGCAATCGATGCATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
5c102e835e7e93bb184ae66e271e964579277fdd0e87998f3a25a8e58a658124
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8185
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50