Protein

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Genbank accession
AFV50639.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MKRFLLAMALLPALAFAGPSDIVTNQRNATDTSSIPRTVAKPPGTQDGLMGFNGSTVLPVHWTIGTGLQISSGSLVALPQAWTEITGKPAFAPVATAGTYASLTGIPSTFPPSAHTQAWSTITSTPTTLAGYGITDAYPLTGNPSGFLTGITSGQVTAALGFTPYNATNPSAYINQAGARSSISLTTTGTSGAATYNSTTGVLNVPNYATPVAPSLNDSPGRALVTTTSATGFQISATRVAHVCYEGSFSTTSTIGGPSSASVFLETADTNSTTPGDWTTKATQTYSNNITLAVVLNQVQGNNWSFCRYIPAGKFVRIRSGSITGTASATINATQQEVLL
Physico‐chemical
properties
protein length:340 AA
molecular weight: 34878,53290 Da
isoelectric point:8,90561
aromaticity:0,07941
hydropathy:0,04412

Domains

Domains [InterPro]
DC_1002
STR
17–230
DC_1002
AFV50639.1
1 340
Architecture
STR
STR 17-230 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage AF
[NCBI] 		1235689 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV50639.1 [NCBI]
Genbank nucleotide accession
JX676771.1 [NCBI]
CDS location
range 24808 -> 25830
strand +
CDS
ATGAAGCGTTTCCTTCTCGCCATGGCACTACTGCCGGCGCTGGCCTTCGCAGGGCCTAGCGACATCGTTACGAACCAGCGCAACGCCACCGATACCAGCAGCATCCCGCGCACGGTGGCCAAGCCGCCAGGAACGCAGGACGGCCTTATGGGCTTCAACGGATCGACCGTGTTGCCAGTGCACTGGACCATCGGAACCGGCCTGCAGATCAGCAGCGGCTCTCTGGTCGCTCTGCCTCAGGCGTGGACAGAAATCACTGGGAAGCCCGCCTTCGCACCGGTGGCCACGGCAGGCACCTATGCCTCGCTTACGGGGATCCCTTCGACGTTCCCGCCATCTGCGCACACGCAGGCGTGGAGCACGATCACCAGTACGCCGACGACGCTGGCCGGTTATGGGATCACGGATGCCTACCCGCTGACTGGGAACCCGTCTGGATTCTTAACCGGAATCACCTCGGGGCAGGTTACTGCCGCGCTTGGATTCACGCCATACAACGCCACCAACCCATCGGCATACATCAACCAGGCCGGGGCCAGATCTTCAATCTCGTTGACGACCACGGGCACGTCTGGCGCCGCCACCTATAACAGCACCACTGGCGTGCTGAATGTTCCGAATTACGCTACGCCTGTAGCGCCGTCGCTCAACGACAGCCCAGGACGAGCCCTAGTCACCACGACCTCAGCGACAGGCTTTCAGATCAGCGCCACTCGTGTAGCCCATGTCTGTTACGAAGGATCATTCAGTACCACATCGACCATCGGCGGGCCATCCTCTGCCAGTGTGTTCCTTGAGACGGCGGACACCAATAGCACCACGCCTGGTGATTGGACGACAAAGGCCACGCAGACCTACAGCAACAACATCACGCTGGCTGTCGTGCTGAACCAAGTCCAGGGCAACAACTGGTCGTTCTGCCGGTACATACCAGCCGGGAAGTTCGTTCGCATACGTTCAGGATCAATCACAGGAACTGCCAGCGCAACGATCAACGCCACGCAGCAGGAAGTATTGCTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
20942462ffcac2d7f17d6d409b9080ad6c88a6425791924f0f3999e245d94d79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6764
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50