Protein

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Genbank accession
QPZ53674.1 [GenBank]
Protein name
putative tail tubular B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARVAAQLSNFTAGELSPRLDGRNDLAKYSAGCATVENMVIYPHGAAARRPGTTFIAEIKSSAAKTRLIPFEFSTTQTYILELGNQYMRFYRDNGQILSSGSPYEISTPYLTAELFDIKFAQSADVMYITHPSHKTRKLSRTGHTSWTLSEVDFTNGPYLDTNTSTTTITASAHTVGTGRTFTASANTFVSTDVGRLIRFRDGYAEVTGFTDATVVTVEILKDTGSASASTDWSLGAFSDTTGHPSCVSFFEQRLVFAATLSQPQTVFFSKSGDYENMDANIGGTVADDDAIIYTIASNQVNAIRFMAAGRTLIIGTAGGEFTVSGGGDNDAVTPTNILIKKQSNHGAANIDAVAVANATLFVQRAKRKIRELAYNFDVDGYIAPDLTILAEHVTKGGITEMAYQEEPLAIIWCVRDDGELVALTYQREQEVVAWHRHVFGGAFGSGKAVCESVAVIPTEDSEYELYMIIKRTINGATKRYVEYLNTFDFDESDNTSFNFLDSQLSYSGSAATTISGLSHLEGQTVSILADGATHPDKTVSSGSITLDRSATDVKVGLGYTSLLKTMRIDAGAQNGTSQAKTKRIYEVTARLYESVGVEIGPDLSNMERVPFRTSSDPMDQGIPPFTGDKEVEFRGNYDTDGFMIVRQTQPLPLTILSLYPRLITNDG
Physico‐chemical
properties
protein length:668 AA
molecular weight: 72543,14220 Da
isoelectric point:5,07125
aromaticity:0,09281
hydropathy:-0,18817

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPZ53674.1
1 668
Domain Start End Length (AA) Confidence
N-terminal 1 494 494 0,8065
Central domain 495 657 164 0,1691
C-terminal 658 668 10 0,8699
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-494
Central
495-657
C-terminal
658-668

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC203P
[NCBI] 		2796523 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53674.1 [NCBI]
Genbank nucleotide accession
MW273925 [NCBI]
CDS location
range 24995 -> 27001
strand -
CDS
ATGGCTAGAGTAGCTGCACAACTTTCAAATTTTACAGCGGGTGAATTATCACCAAGATTAGATGGTAGAAATGATTTAGCAAAATATTCTGCTGGTTGCGCAACTGTAGAAAACATGGTTATCTATCCACATGGTGCTGCAGCTCGTAGACCCGGCACAACTTTTATTGCTGAAATAAAATCAAGTGCTGCTAAAACAAGATTAATACCTTTTGAATTTTCAACTACACAAACTTATATTTTAGAATTAGGTAATCAGTACATGAGATTTTATAGAGATAATGGTCAGATATTATCTAGTGGATCTCCTTATGAAATATCTACACCTTATCTTACTGCAGAACTTTTTGATATTAAGTTCGCACAAAGTGCTGACGTAATGTACATTACACATCCTAGCCACAAAACTAGAAAGCTGTCAAGAACAGGTCATACGTCTTGGACATTATCAGAAGTAGATTTTACTAATGGTCCATACCTAGATACCAACACATCAACTACAACAATTACAGCTTCAGCACACACAGTAGGAACTGGTAGAACTTTTACTGCTAGTGCTAATACATTTGTTTCAACAGATGTTGGAAGATTAATTAGATTTAGAGATGGTTATGCAGAGGTAACAGGATTTACAGATGCTACAGTTGTAACTGTAGAAATATTAAAAGATACAGGATCAGCTAGTGCTTCTACTGATTGGTCTTTAGGTGCGTTCTCAGATACCACTGGTCATCCTTCTTGCGTATCATTTTTTGAACAGCGATTAGTTTTTGCTGCAACTTTATCACAACCACAAACAGTATTCTTTTCTAAATCTGGTGATTACGAAAACATGGATGCAAACATTGGTGGTACTGTAGCAGATGATGATGCAATTATTTATACAATCGCATCCAACCAAGTTAATGCAATTAGATTTATGGCAGCCGGTAGAACTTTAATCATTGGTACTGCAGGTGGTGAGTTTACAGTTAGTGGTGGTGGAGATAATGATGCTGTTACACCAACAAACATTTTAATTAAAAAACAATCTAACCATGGTGCCGCAAACATAGATGCTGTTGCAGTTGCTAATGCAACTTTGTTTGTACAAAGAGCTAAAAGAAAAATAAGAGAACTTGCATACAACTTTGATGTAGATGGTTACATAGCTCCGGATCTAACTATCCTTGCCGAACACGTTACTAAAGGTGGTATAACAGAAATGGCATATCAAGAAGAACCTTTAGCAATTATTTGGTGTGTAAGAGATGATGGTGAATTAGTTGCACTAACATATCAAAGAGAACAAGAAGTAGTTGCTTGGCATAGGCATGTTTTTGGTGGAGCTTTCGGAAGTGGTAAAGCAGTTTGTGAATCTGTTGCAGTAATACCAACTGAAGATAGTGAATATGAATTATACATGATTATTAAAAGAACAATTAATGGCGCAACTAAAAGATATGTAGAATATTTAAATACGTTTGATTTTGATGAAAGTGATAACACATCTTTTAATTTTTTAGATTCACAATTATCTTATAGTGGATCAGCAGCAACAACTATATCTGGATTATCACATCTTGAAGGACAAACAGTTTCTATATTAGCAGATGGCGCAACGCATCCAGATAAAACTGTTAGTTCGGGTTCAATAACATTAGACCGATCTGCTACTGATGTTAAAGTAGGATTAGGATATACATCATTATTAAAAACAATGAGAATAGATGCTGGTGCGCAGAATGGTACATCACAAGCTAAAACAAAAAGAATATACGAAGTTACTGCAAGATTATATGAAAGTGTTGGTGTTGAAATAGGACCCGACCTAAGTAATATGGAGAGAGTTCCATTTAGAACATCAAGTGATCCTATGGACCAAGGTATTCCACCATTCACAGGAGATAAAGAAGTAGAGTTTAGAGGAAATTATGATACAGATGGATTTATGATTGTTAGACAAACACAACCTTTACCTCTGACAATCTTATCATTATACCCAAGGTTAATAACAAATGATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff66d27abf01378911f485707530469f8c85e786c5b6c42720a206798f92b4b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9444
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank