Protein

View in Explore
Genbank accession
QBX23728.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MTANEWANSAVILREGEIGFETDTGFAKFGDGNSRFSALKYLTGPQGETGETGPQGPPGQRGEKGKTGDTGPQGPPGPTGEQGPKGDTGAKVTGGTLAVGQLTLSLDDGSQAVVKGDFRGPKGPVGPQGPKGADGKMTFEQLTEEQREQLKGPKGDTGQRGAAGPKGPKGDNGAQGPMGPRGERGPAGDPAALPYDVVRRGELSGYVRQADIRSLINNAGKLKDETTGQYLSVRVVDKGSVPHNTSGMIVFERSGGK
Physico‐chemical
properties
protein length:257 AA
molecular weight: 26340,78070 Da
isoelectric point:7,83505
aromaticity:0,04669
hydropathy:-0,83346

Domains

Domains [InterPro]
SSF69349
STR
1–253
SSF69349
PTHR24637
Unmapped
43–192
PTHR24637
IPR008160
STR
44–91
IPR008160 IPR008160
G3DSA:1.20.5.320
STR
62–115
G3DSA:1.20.5.320
QBX23728.1
1 257
Architecture
STR
STR 1-253 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan146
[NCBI] 		2548006 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23728.1 [NCBI]
Genbank nucleotide accession
MK448854.1 [NCBI]
CDS location
range 34352 -> 35125
strand +
CDS
ATGACTGCTAATGAGTGGGCTAACAGTGCTGTCATCTTACGTGAAGGTGAGATAGGTTTTGAGACCGACACAGGCTTTGCGAAGTTTGGTGACGGTAATAGCCGCTTTAGTGCCCTCAAATACCTTACTGGACCCCAAGGTGAAACTGGAGAAACTGGCCCTCAGGGTCCTCCTGGTCAGCGAGGAGAAAAAGGCAAGACTGGTGATACAGGTCCGCAAGGTCCGCCCGGCCCCACAGGAGAGCAGGGTCCTAAAGGTGACACTGGTGCTAAGGTAACTGGTGGCACGCTAGCAGTTGGACAATTAACACTTAGCTTAGATGATGGCTCACAGGCTGTTGTCAAGGGCGATTTTAGAGGTCCTAAAGGCCCAGTAGGCCCACAAGGACCTAAGGGTGCTGACGGAAAAATGACCTTTGAACAGCTCACCGAGGAGCAACGTGAGCAATTAAAAGGGCCTAAAGGTGACACTGGTCAAAGAGGAGCGGCGGGTCCAAAGGGTCCAAAGGGTGATAATGGTGCACAGGGGCCAATGGGTCCAAGAGGTGAACGGGGACCAGCAGGAGATCCAGCGGCTTTGCCTTACGACGTTGTACGACGAGGGGAGCTATCAGGTTACGTCAGACAAGCTGATATACGATCGTTGATTAACAACGCAGGCAAGCTCAAAGATGAGACGACAGGACAATATCTATCTGTCCGTGTGGTGGATAAAGGTAGTGTGCCGCATAATACCTCAGGCATGATTGTGTTTGAGCGCTCTGGAGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9cbe2a162ddca6de7621ca5d352b18b14677ba046da5c2d7083db69d6ff093ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7904
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank