Protein

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Genbank accession
AMW61237.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIYVKDFSGITEAVKIQNAINAAAAATSSSKTVMLEEKDYYLESSLTLLNDVELLFGYRSRLVIGGNFPVLLIGRNASVTNPFIAIDAPTFDSPVFYLDGKNKYYNTWNKTAIKDGVVLNWTGSHKGVGIRFYSGGTDHEISFVDTSNIKLVGLRKGIELEAKAPATGMSWVNANRFDKISIEDCVEMITIDSSETIPNECSGNTFSNLQLQPSTATTKVLKVSGQHNRFDGMLWDISLIPTSKFVDITANSSFTKIDFNRSLPSTKVQDNGASTILL
Physico‐chemical
properties
protein length:278 AA
molecular weight: 30477,20260 Da
isoelectric point:5,68369
aromaticity:0,09353
hydropathy:-0,08094

Domains

Domains [InterPro]
IPR012334
STR
12–276
IPR012334
IPR011050
STR
15–219
IPR011050
IPR011050
STR
15–230
IPR011050
DC_0399
RBD
213–278
DC_0399
AMW61237.1
1 278
Architecture
STR
STR 12-278
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMW61237.1
1 278
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,8547
Central domain 12 267 257 0,9945
C-terminal 268 278 10 0,2356
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-267
C-terminal
268-278

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Nigalana
[NCBI] 		1805951 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMW61237.1 [NCBI]
Genbank nucleotide accession
KU737344.1 [NCBI]
CDS location
range 33774 -> 34610
strand +
CDS
ATGATATATGTGAAGGACTTTAGTGGCATTACCGAGGCTGTCAAGATACAAAATGCTATCAATGCCGCAGCCGCAGCAACATCTTCATCAAAGACTGTCATGCTAGAAGAGAAAGATTATTACCTAGAGTCGTCTCTTACTTTGTTGAATGATGTAGAGTTATTGTTCGGATATCGTTCAAGATTAGTTATTGGCGGTAATTTCCCTGTACTACTAATAGGGCGCAATGCTTCTGTTACAAATCCATTCATAGCTATCGACGCTCCAACTTTCGATTCACCTGTCTTTTATCTCGATGGTAAGAATAAATATTACAACACATGGAATAAAACAGCTATAAAAGATGGTGTCGTCCTCAACTGGACAGGTTCTCACAAAGGTGTGGGTATCCGATTCTACTCTGGAGGAACTGACCATGAGATTTCATTCGTAGATACATCAAACATCAAACTAGTAGGTTTAAGAAAAGGTATTGAACTAGAAGCTAAAGCTCCAGCTACTGGGATGTCTTGGGTGAACGCAAATCGTTTCGATAAGATATCCATTGAGGATTGCGTAGAGATGATTACGATTGACAGCAGTGAGACAATCCCGAACGAATGTAGTGGTAATACTTTCTCCAATCTTCAACTACAGCCATCTACCGCAACAACAAAAGTATTAAAAGTAAGTGGACAGCATAACCGATTCGATGGTATGCTCTGGGATATCTCTTTAATACCTACATCTAAGTTTGTAGATATTACAGCGAATAGTTCCTTTACGAAGATAGATTTTAACCGTTCCTTACCTAGTACGAAAGTACAAGATAATGGAGCAAGTACAATTCTACTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cc123ad1e0a87b277f667a2c726565765530b2ac9ae53de36150a345954ee9e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9168
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50