Protein

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Genbank accession
YP_009286360.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MGNYCSRCRNFMGGKYTLIINVLNKDLVPVTFIDNDIPGLPSYYKDTLIDYLSLGTASFEFTILKSKNNIIQDYSRFFNDETCFSFEKNGKQYAVFPAGSDGFYETDTEITYKCLSLDRELSLEYVDKFDNSSTHTLQWYIDYFELISNNQIEIGRNDVADYTRVIKYDSQDTKLNRLLSLINNFDAEFEFITKLTNNGAVDKIILNIVKKRDDSGKGGIGAIRDDVELVYGKNVKGIERTYNFEFFNASKVIGKDGTNWNSSEFSYINSDGVEEFYKRKNDDTAFAPLSAQKYPAHLRKDSSDIWLRKNFETEYTTPAQMWGYIVQQFKSYAYPQITYKIKTNSNLVSQALDGKLPIQIGDTVTIEDDNFSNEQGDFGLILRARATEIKSSDSNPETNEITFENFVELQNDLSDDLMTQVNQLVDAATPYRAELTTTNGTQFKNGTGSTTLSAHIFKGSATAETIADSYEWSKDGTIVAPTQTITVDASGVTDKAVYSFKATVAGKVVANQSVTITNVDDGISPINLVINSSNGYQFKNNIIDTTFTARLYQNNKEIDRDGTEFAYVWSKTNSDGTVDTAWNLAHQTSQKSITITNRDIWQRATFDCTAEPLN
Physico‐chemical
properties
protein length:614 AA
molecular weight: 69246,86670 Da
isoelectric point:4,72545
aromaticity:0,11726
hydropathy:-0,48550

Domains

Domains [InterPro]
DC_0266
STR
2–527
DC_0266
IPR010572
ENZ
228–407
IPR010572 DC_0977
YP_009286360.1
1 614
Architecture
STR
RBD
STR 2-527 | RBD 528-611 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 98201
[NCBI] 		1871690 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009286360.1 [NCBI]
Genbank nucleotide accession
NC_031064.1 [NCBI]
CDS location
range 29021 -> 30865
strand +
CDS
TTGGGTAACTATTGCTCCAGATGTAGAAATTTCATGGGAGGAAAATATACTTTGATTATTAATGTTTTAAATAAAGACTTAGTTCCAGTAACTTTCATTGATAATGATATTCCCGGTTTACCAAGTTATTACAAAGATACTTTGATTGATTATCTAAGTCTAGGTACAGCATCATTTGAATTTACGATATTAAAATCCAAAAACAACATCATTCAAGACTACTCCAGATTTTTTAATGATGAGACATGCTTCTCTTTCGAGAAAAATGGTAAACAATATGCAGTTTTTCCTGCTGGTTCAGATGGGTTCTATGAAACAGACACAGAAATAACGTATAAATGTTTATCACTAGACCGTGAATTGTCTTTAGAATATGTTGATAAGTTTGATAATTCATCAACTCATACTCTGCAATGGTATATCGATTATTTTGAATTAATTTCAAACAATCAAATTGAAATTGGAAGGAATGATGTTGCTGATTATACAAGAGTCATAAAATATGATTCCCAAGATACAAAACTAAATCGCCTTTTATCTTTAATTAACAACTTTGATGCCGAGTTTGAGTTTATTACAAAACTAACCAATAATGGCGCGGTTGATAAAATAATTTTAAATATCGTTAAAAAACGCGATGATTCAGGCAAAGGTGGTATAGGGGCAATCAGGGATGATGTTGAGCTTGTATATGGAAAGAACGTTAAGGGGATTGAGAGAACTTATAATTTTGAGTTCTTTAATGCGTCTAAAGTTATAGGTAAAGATGGAACTAATTGGAATTCAAGTGAATTTTCCTATATTAATTCAGATGGAGTTGAGGAGTTTTATAAAAGAAAAAATGACGATACAGCATTTGCTCCACTTTCTGCTCAGAAATATCCAGCTCATCTTAGAAAAGACTCTTCAGATATATGGCTTAGGAAAAATTTTGAAACCGAGTATACTACTCCTGCTCAAATGTGGGGATATATTGTTCAACAATTTAAGTCATACGCTTATCCTCAGATTACTTATAAAATCAAAACAAATAGCAATTTAGTATCGCAAGCTCTCGATGGAAAACTTCCTATTCAGATTGGTGATACAGTAACCATTGAAGATGATAATTTTTCAAATGAGCAAGGTGATTTCGGATTAATTTTAAGAGCGAGAGCAACTGAAATTAAATCATCCGATAGTAATCCAGAAACAAACGAAATCACCTTTGAAAATTTCGTTGAATTGCAAAATGATTTATCAGATGACCTAATGACACAAGTCAATCAGTTAGTTGATGCAGCTACTCCATACCGAGCAGAGCTTACAACCACAAACGGCACACAGTTCAAAAATGGCACTGGTTCAACAACTTTATCAGCTCATATTTTCAAAGGTTCTGCAACGGCTGAAACAATCGCAGACAGTTACGAATGGTCGAAAGATGGGACTATTGTCGCTCCAACTCAGACTATCACAGTTGATGCCAGCGGAGTAACTGATAAGGCAGTTTATAGTTTTAAAGCAACGGTTGCGGGTAAAGTAGTCGCAAATCAGTCGGTTACCATCACTAATGTAGATGATGGAATTAGCCCGATTAATTTAGTTATTAATTCATCTAATGGCTATCAATTTAAAAATAATATTATTGATACAACTTTCACTGCAAGACTTTATCAAAATAATAAAGAAATTGATAGAGATGGCACAGAATTTGCTTATGTATGGTCTAAAACTAACTCTGACGGAACAGTAGATACCGCTTGGAATCTTGCTCATCAAACAAGTCAGAAATCAATTACAATCACAAATAGAGATATTTGGCAGAGAGCTACATTTGATTGTACTGCCGAACCACTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5cc55a1eddca7abc9484e5c3f0d3fb542aef3f3c40da0c9059752bb68b033b60
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8856
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of eight prophages isolated from Lactococcus lactis dairy strains Oliveira,J. and van Sinderen,D. 2016-12-29 — GenBank