Protein

View in Explore
Genbank accession
AIX13128.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MSRNLEDIFGGLATAPRQSVKVFHATASTPKVTMDKDFVTIGVTVNKGALTPGEDFTVDGRDVFLTPPLVAGDEAVFYLNTSWSPKEVEGQYARVITYRSTGGENKYTADADFSSVLFFYDNKPWAPGVDYTTSGRDINFTNPMVADKQVYIILNGGKGALSAYEKRDDADARYQEVLQAIINSNPVNFPVANQTAMLALDAKISDTATRSDQNGRIYFLGALPASKLDNWKPFVEIANQVLSVNGRSGDVVVAEAGDNDDITSLNALSGPLRLGGDAVNQYDAVTLKQLLANGGSGAGGANMNGVMNSYLGAVHWFNGTRASIIAGHGAGDGQLLKRADYSDLWNAINSGVYVSVSDADWQSTPTARGAYSTGDGSTTFRLPDLNGVWQHPTNAALNSIPALFLRGDGAVPNTGTGVGVIRKSAAPNITGNLGNLAGSKQNSSATDTAPNGAMKWTGSTGPTAASAGTTPPSTGLFDLNFDASRSNSVYGQDATTEVRPNSVKGIWIIRLNGKFSAANTNFNVINADTAVPANNTIVYGGDLVSNYQVAGSDYMVSKFRSRATIGGAASVKGAEIVIEDRSSTTVASKTFQFAIDGSLALPGGALRMRNLAGTQEMNIGINTADNSQAVINRTTGITALNFNGTQILYADMNYLTSPIVTRLTNDPVNPGVGEYLNTPEIRSGFRSRGNYNGTPYAYVSLYSQEHVGDIYSGILQVSGFTANAAFYFVQNGNARAAGSWMSGSDIRHKFKKKMAGGEPKDALLAVMSWRGMVYQKLDGEMEVGLIAQDVEKACPEAVSTSERKFSNGAEIKDFKSLNTSGASAAFHTEAIKGIVDLLDMILNDSDMSRARERVAALKAAMVTEADLPSDSVGSVVPKDLL
Physico‐chemical
properties
protein length:881 AA
molecular weight: 93314,94880 Da
isoelectric point:5,31708
aromaticity:0,08173
hydropathy:-0,20817

Domains

Domains [InterPro]
DC_1656
STR
175–226
DC_1656 DC_0162
IPR030392
CHP
744–861
IPR030392
IPR030392
CHP
744–798
IPR030392
AIX13128.1
1 881
Architecture
STR
STR
STR 175-226 | STR 244-878 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX13128.1
1 881
Domain Start End Length (AA) Confidence
N-terminal 1 793 793 0,3742
Central domain 794 870 78 0,3952
C-terminal 871 881 10 0,8890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-793
Central
794-870
C-terminal
871-881

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phiEa2809
[NCBI] 		1564096 Uroviricota > Caudoviricetes > Pantevenvirales > Nezavisimistyvirus > Nezavisimistyvirus Ea2809
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX13128.1 [NCBI]
Genbank nucleotide accession
KP037007.1 [NCBI]
CDS location
range 127833 -> 130478
strand -
CDS
ATGAGTCGCAATTTAGAAGATATCTTTGGCGGCCTGGCGACAGCACCACGTCAGTCCGTCAAAGTTTTTCACGCCACGGCGTCTACGCCCAAAGTCACGATGGACAAAGACTTTGTGACAATCGGCGTTACAGTCAACAAAGGTGCCCTGACCCCAGGTGAAGATTTCACTGTGGATGGCCGGGACGTCTTCCTCACACCTCCTTTGGTAGCAGGCGATGAAGCCGTGTTCTATCTGAACACTTCATGGTCACCAAAAGAAGTTGAAGGCCAGTATGCTCGAGTGATCACCTATCGTTCAACGGGTGGTGAGAACAAGTATACGGCTGACGCAGATTTCTCTTCAGTCCTGTTCTTCTATGACAACAAGCCCTGGGCACCTGGTGTTGATTACACCACCTCTGGTCGTGATATCAACTTCACTAATCCCATGGTCGCCGACAAACAGGTCTACATCATTCTGAATGGCGGCAAGGGTGCTCTGTCTGCTTATGAAAAGCGCGACGACGCCGACGCTCGTTACCAAGAAGTGCTCCAGGCTATTATCAATTCCAACCCAGTCAACTTCCCTGTGGCTAACCAGACTGCAATGCTGGCGTTGGATGCAAAGATCAGTGATACAGCAACCCGTTCAGACCAGAATGGACGCATCTATTTCCTGGGCGCTTTGCCTGCTTCTAAATTGGACAACTGGAAGCCGTTTGTAGAAATCGCGAACCAGGTACTCAGCGTTAATGGTCGTTCTGGTGACGTGGTAGTTGCTGAAGCAGGTGACAACGACGACATTACTAGCCTCAACGCGCTCTCCGGCCCTCTCCGTCTGGGTGGCGATGCTGTCAACCAGTATGACGCCGTTACCCTGAAGCAGCTCCTCGCCAATGGAGGAAGCGGTGCAGGTGGCGCTAACATGAATGGTGTGATGAACTCATACCTGGGTGCTGTTCATTGGTTCAACGGCACACGTGCTTCTATCATTGCTGGTCATGGTGCCGGTGATGGTCAGTTACTGAAGCGTGCTGACTATTCAGATCTGTGGAATGCTATCAACAGTGGTGTATATGTGTCCGTTTCTGATGCTGATTGGCAGTCTACGCCTACAGCACGCGGTGCATACTCTACAGGTGATGGTTCGACTACTTTCCGTCTTCCTGACCTGAACGGTGTTTGGCAACACCCGACCAATGCTGCATTGAACTCTATCCCTGCGCTGTTCCTGCGTGGTGATGGTGCTGTTCCCAATACAGGGACCGGCGTCGGCGTTATCCGTAAGAGTGCTGCTCCAAACATTACAGGCAACCTTGGAAATCTTGCGGGTAGCAAACAGAATTCAAGCGCAACCGACACAGCTCCGAATGGTGCGATGAAATGGACTGGCAGCACTGGCCCTACTGCCGCAAGTGCAGGGACTACACCACCAAGCACTGGTTTGTTTGACCTGAACTTCGACGCCAGCCGTTCTAATTCTGTTTACGGCCAGGATGCGACTACTGAAGTCCGCCCAAACAGCGTTAAGGGTATCTGGATCATTCGTCTGAATGGAAAGTTCAGCGCAGCGAACACCAACTTCAACGTGATCAACGCCGACACAGCAGTGCCTGCAAACAACACGATTGTTTATGGTGGCGATTTGGTTTCCAACTATCAGGTAGCTGGCTCTGATTACATGGTTTCAAAATTCCGTTCACGCGCAACAATTGGCGGTGCAGCTAGTGTGAAAGGCGCGGAAATCGTTATCGAGGATCGTTCGAGCACTACGGTTGCCTCTAAGACATTTCAGTTCGCAATTGACGGGAGTTTGGCTTTACCGGGCGGCGCTCTTCGTATGCGCAACCTTGCTGGCACGCAAGAAATGAATATCGGTATCAACACCGCCGATAATTCCCAGGCTGTGATTAACCGAACCACAGGAATTACAGCTCTAAACTTCAACGGCACACAAATTTTGTATGCCGATATGAACTATCTGACCTCACCAATTGTAACAAGATTGACGAACGACCCAGTGAATCCAGGAGTTGGGGAGTATCTGAACACGCCTGAGATTCGTTCTGGTTTCCGTTCACGCGGCAACTATAATGGAACCCCTTACGCATATGTCAGTCTTTACTCCCAGGAGCACGTGGGTGATATCTATTCGGGCATTTTGCAAGTCAGCGGGTTTACTGCAAATGCGGCGTTCTATTTCGTTCAGAACGGTAATGCGCGGGCGGCGGGTTCATGGATGTCAGGATCGGATATTCGTCACAAGTTCAAAAAGAAAATGGCGGGCGGGGAACCAAAAGACGCACTGTTGGCCGTGATGTCTTGGCGTGGTATGGTCTACCAGAAGTTGGATGGCGAAATGGAGGTCGGTCTGATCGCCCAAGACGTTGAGAAGGCTTGCCCAGAGGCTGTGTCAACATCTGAGCGTAAATTCTCCAACGGCGCGGAGATCAAAGACTTCAAGAGCCTGAACACCTCAGGCGCTTCAGCAGCGTTCCATACAGAGGCTATCAAAGGAATCGTAGACCTTCTGGACATGATTCTGAACGACTCAGATATGTCACGTGCTCGTGAGCGTGTAGCAGCCCTGAAAGCCGCTATGGTGACCGAGGCTGATCTGCCATCTGATAGCGTTGGATCAGTCGTTCCAAAGGATCTTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c489775df3bb8241299473c4b8d48fb3c66661b188c3540bad21975d2f7bbff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new ViI-like Erwinia amylovora bacteriophage Lagonenko,A.L. and Valentovich,L.N. — — GenBank