Protein

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Genbank accession
URG13984.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADKSPVKISQLPEPTGTGINDSDIFAASRITGADKLETQRITVSELRKLMDYGNAFSDLNAAIAATVKDQQFYVFVDDSKEFVYRYVNMGGIASPVLDMSGNPLREPTKELVKHLEQIRSSVGFGLIGQIKSFDELRATEPTFPGQRVLLSGYRDGANYGGGEFFHDVADKNTADNSGTVAVTPGGARWKRVIVDTSTNHAEWWGVHYSQADNAVALKKAADASRKKILMLPQGSNANPIVIRSPIVFQTNCGIKLRGCGVKDSTTISVQIGPGYETYGALHFPGRNPTTNAMEAGFAGIEISNVQLLGNLSTCRGIYLQYQYQSLFSYVNVERFNGAGLYLDKSQDSDFNFFNVWDCGRTNGDRTSNVDTFDMTKTAESPIVAVSTITNDFCNYLRFNDCQFEDNHVCPVMDLNWGIENYINNCHVEFNANWNITGAPTPYFLKMQQGVTKINGGGIAEYQGIQHNYGELYLRDVRCSPGIVYTMLNDVTSRAEFHGISFYSIPGLARKRFTKFEYCNFSQPVTLAYPNSDIWFDKCTFVGDFTTTHAGADLRMTIRGCYFNANVTIADDTTNVFMDGCYIAGDANYGSGGGMWGNNKVLGTFTQTSNGVRWVTPTFKQVVGTSAPTTGSFRVGDLCWNTAPTAGGVTHWRCVTAGSPGTWRAVSIVS
Physico‐chemical
properties
protein length:670 AA
molecular weight: 73587,66230 Da
isoelectric point:5,92952
aromaticity:0,11343
hydropathy:-0,25701

Domains

Domains [InterPro]
DC_1164
ATT
3–130
DC_1164 IPR059934 DC_0987
DC_0717
ATT
100–236
DC_0717
URG13984.1
1 670
Architecture
ATT
STR
ATT 3-236 | STR 237-668 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG13984.1
1 670
Domain Start End Length (AA) Confidence
N-terminal 1 214 214 0,9937
Central domain 215 607 394 0,9908
C-terminal 608 670 62 0,9557
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-214
Central
215-607
C-terminal
608-670

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_ParM-25
[NCBI] 		2939654 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13984.1 [NCBI]
Genbank nucleotide accession
ON375847.1 [NCBI]
CDS location
range 22457 -> 24469
strand +
CDS
ATGGCCGATAAATCACCAGTTAAAATATCTCAGTTACCCGAGCCTACCGGGACTGGGATTAACGATAGCGACATCTTCGCGGCATCCCGTATAACGGGAGCAGATAAGTTAGAGACTCAACGTATCACTGTCAGCGAATTGCGTAAGCTGATGGATTACGGTAATGCATTCTCTGACTTGAACGCAGCTATTGCAGCAACCGTTAAAGATCAACAGTTTTACGTATTCGTTGATGACTCGAAAGAGTTCGTTTACCGTTACGTGAACATGGGCGGAATTGCTTCCCCAGTTCTCGATATGTCAGGTAATCCGCTCAGGGAACCAACCAAAGAACTTGTTAAACATCTTGAACAAATACGTTCTAGTGTCGGTTTCGGATTGATTGGCCAGATTAAATCATTCGATGAGCTACGGGCAACAGAGCCTACCTTCCCTGGTCAGCGTGTATTACTCAGCGGATATCGAGATGGCGCTAACTACGGCGGAGGGGAATTCTTCCACGACGTAGCTGACAAAAATACAGCCGACAATTCAGGTACAGTGGCAGTTACCCCAGGAGGGGCGCGCTGGAAACGGGTTATCGTTGACACATCTACTAACCATGCCGAGTGGTGGGGTGTACATTACTCTCAGGCAGATAACGCAGTTGCGTTAAAGAAGGCAGCAGACGCATCACGCAAAAAGATACTTATGCTTCCACAAGGTAGTAACGCTAACCCGATCGTAATTCGTAGCCCTATCGTATTCCAGACTAACTGCGGGATTAAACTGCGCGGCTGCGGTGTCAAAGACTCCACGACCATCTCTGTTCAAATCGGCCCTGGTTATGAAACCTACGGAGCCCTTCACTTCCCTGGCCGTAACCCTACCACCAATGCGATGGAAGCCGGTTTCGCTGGGATTGAAATTAGTAACGTTCAGTTGTTGGGTAACTTGAGTACCTGTCGTGGCATTTATCTTCAGTACCAATATCAGTCTCTGTTCAGTTACGTTAACGTAGAGCGCTTCAACGGTGCCGGTCTTTATCTTGATAAGAGCCAAGATAGCGATTTCAACTTCTTTAACGTTTGGGATTGTGGTCGTACTAACGGGGATCGTACATCTAACGTTGATACGTTCGACATGACGAAAACAGCGGAGTCTCCGATCGTAGCAGTTAGTACCATTACTAACGACTTCTGTAACTATCTCCGTTTCAACGACTGTCAGTTCGAAGATAACCACGTATGCCCGGTTATGGACCTTAACTGGGGTATTGAGAACTACATCAACAACTGTCACGTTGAGTTTAACGCTAACTGGAACATCACGGGAGCACCCACCCCATACTTCCTTAAGATGCAACAGGGCGTAACTAAAATCAACGGAGGCGGTATTGCCGAGTATCAGGGCATTCAGCATAATTACGGTGAACTCTATCTCCGTGATGTTCGATGTTCCCCAGGTATCGTTTACACCATGCTTAACGATGTAACGAGCCGTGCAGAATTCCACGGGATCAGTTTCTATTCAATCCCTGGGTTGGCACGTAAACGATTCACTAAGTTTGAGTATTGTAACTTCTCCCAACCAGTTACATTAGCGTACCCTAACTCGGATATCTGGTTTGATAAATGTACGTTCGTGGGAGATTTCACTACTACCCATGCTGGTGCAGATCTCCGTATGACAATCAGAGGTTGTTACTTCAATGCTAACGTAACTATCGCAGACGATACGACTAACGTATTCATGGACGGGTGTTATATCGCAGGTGATGCCAACTATGGTTCAGGCGGCGGGATGTGGGGTAACAACAAAGTACTCGGTACGTTTACTCAAACGAGTAATGGTGTTCGCTGGGTAACTCCTACGTTCAAGCAAGTGGTAGGTACAAGTGCCCCAACGACCGGATCCTTCAGAGTCGGTGATTTGTGCTGGAATACTGCACCTACTGCCGGAGGCGTCACTCACTGGCGTTGTGTCACGGCAGGTAGTCCTGGTACCTGGCGCGCAGTCTCAATTGTTTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
df745cf0d85d049ffe45325aea84b49fe76b4ae763c4b97509d5a440788bf628
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8280
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50