Protein

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Genbank accession
AID18339.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MPDDILIEDLPLGTPSRNAWVPVSNAGDIGRLTVGQMLDLLVDGAPATLDTLNEIAAALNDDANLAATLTAAIALKADASTTTTHALTAKTTPVDADEFRIADSAASFGFKKITWANIKAGIKSFFGATGAAPVYACRGWVKFAGASGTIGASGNVTSVVRNGVGDYTVNFTDNMPDTNYATALCASGSTSSATDTVNVNATGGQQVSSVRLIAVRAGIGAFDPTNVSVAVFR
Physico‐chemical
properties
protein length:233 AA
molecular weight: 23732,29600 Da
isoelectric point:4,62677
aromaticity:0,06438
hydropathy:0,19313

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage vB_RleM_PPF1
[NCBI] 		1498228 No lineage information
Host Rhizobium leguminosarum strain F1
[NCBI] 		2750659 Kiritimatiellota > Kiritimatiellia > Kiritimatiellales > Pontiellaceae > Pontiella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AID18339.1 [NCBI]
Genbank nucleotide accession
KJ746502.1 [NCBI]
CDS location
range 19546 -> 20247
strand +
CDS
ATGCCAGACGATATTCTTATTGAAGATCTGCCTCTTGGGACGCCATCACGCAACGCCTGGGTACCAGTTTCAAATGCTGGGGACATCGGCAGGCTTACCGTCGGGCAAATGCTCGACCTTTTGGTTGATGGTGCTCCAGCCACACTCGACACGCTCAATGAAATAGCCGCGGCGCTCAACGATGACGCAAACCTTGCCGCGACCTTAACGGCTGCGATTGCGCTGAAAGCAGATGCATCAACCACTACCACTCACGCGCTGACGGCGAAGACAACGCCGGTTGATGCCGACGAGTTCAGGATCGCTGACAGTGCCGCCTCATTCGGTTTTAAGAAAATCACCTGGGCGAACATCAAGGCGGGCATCAAAAGCTTTTTCGGCGCGACGGGAGCAGCGCCAGTCTATGCCTGCAGAGGGTGGGTGAAGTTCGCCGGTGCTAGCGGCACAATCGGGGCATCTGGGAACGTCACCAGCGTAGTTCGGAACGGGGTCGGTGATTATACCGTCAACTTCACGGACAATATGCCTGACACCAACTACGCGACGGCGCTTTGTGCCTCGGGATCAACCAGTTCCGCGACCGACACCGTCAACGTGAATGCTACAGGTGGGCAGCAGGTGTCCTCTGTTCGGCTAATTGCAGTTCGGGCGGGTATCGGAGCCTTTGATCCAACCAACGTATCTGTGGCGGTGTTCAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab22ae7fb7bbbb6f7245fa355c43bffd9270b8e3291a445ac4c56adff3b57224
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the temperate phage vB_RleM_PPF1 and its site-specific integration into the Rhizobium leguminosarum F1 genome Halmillawewa,A.P., Restrepo-Cordoba,M., Perry,B.J., Yost,C.K. and Hynes,M.F. 2016 26377943 GenBank