Protein

View in Explore
Genbank accession
AHY26517.2 [GenBank]
Protein name
arm scaffold protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MANFLKNLHPLLRRDRNKKDNQDPNFALIDALNEEMNQVEKDAIESKLQSSLKTSTSEYLDKFGDWFGVYRKTDEKDDVYRARIIKYLLLKRGTNNAIIDAIKDYLGRDDIDVSVYEPFTNIFYTNKSHLNGEDHLMGYYYRFAVINVSIGDYFPVEIIDVINEFKPAGVTLYVTYDGASTIRGGAIIKWLDGLPKIETYQEFDRFTGYDDTFYGHINMNQSKDTDNSSSDIFKTNHSLINSLDVLTGSSSVGRQYINYGYVTSYVYNPGMTSSVNQISASTEGRGQEVPTDYYMYTSTKNNNTVELSMQTTSGVSYLYNNFNFRDYMSKYRPQVDLQSDEARRIVSDYIKELSIDYYLSAVIPPDESIEIKLQVYDFSINRWLTVSINNLSFYEKNIGSNIGYIKDYLNSELNMFTRLEINAGKRDSVDIKVNYLDLMFYYYERGIYTIKPYKALIENYLDISRETYVEAFKIASLSNGDIITKTGFQPIGYLKLVGNYENTIPSTINIVAKDTDNNPIESNELDVYNTVENRNLLQSYKGVNTIAREITSTKEFTVSGWAKEIYSTNYLSKVLKPGKVYTLSFDMEITGNDPTLKSYSDNHGIYLYSNTKGIVVNGVKSMERTIGNKVSVTQTFTAPTITDHRLLIYTGRYTSDGKASTPPVFFNTVKITELKLTEGSSKLEYSPAPEDKPNVIEKGIKFNNILTNIQTLSINSDTILKNVTLYYSYYGDSWVELKTLGNISTGETTETNNLIDLYGLQTVDYSNINPMSKVSLRSIWNVKLGELNNQEGSLSNMPNDYFNAVWQDIDKLSDIELGSMRMVKDTEGGVFDGATGEIIKATLFNVGAYTDLDMLAYTLTNYTEPLTLGSSRLISELKEELLTSESFNVDNRIKVIDSIYEELPNTSIIKNGFVEREVTGSKYLDYGLYEPIEDGTRYKLIVEGEFKDNIEFISLYNSNPNFNETFIYPSEIINGVAEKEFIAKPSTEDKPRLNTDVRIYIRPYDSTISKVRRVELRKV
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 116275,96940 Da
isoelectric point:4,92001
aromaticity:0,11678
hydropathy:-0,43651

Domains

Domains [InterPro]
IPR060691
STR
27–120
IPR060691 DC_1746
Coil
Unmapped
29–49
Coil
AHY26517.2
1 1019
Architecture
STR
STR
STR 27-120 | STR 463-769 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHY26517.2
1 1019
Domain Start End Length (AA) Confidence
N-terminal 1 638 638 0,6357
Central domain 639 928 291 0,2355
C-terminal 929 1019 90 0,1784
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-638
Central
639-928
C-terminal
929-1019

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage 812
[NCBI] 		307898 Uroviricota > Caudoviricetes > Herelleviridae > Kayvirus >
Host Staphylococcus
[NCBI] 		1279 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHY26517.2 [NCBI]
Genbank nucleotide accession
KJ206563 [NCBI]
CDS location
range 72836 -> 75895
strand +
CDS
GTGGCTAATTTTTTAAAGAATCTTCATCCATTATTAAGAAGAGATAGAAATAAAAAAGATAATCAAGACCCTAACTTTGCTCTGATAGATGCACTCAATGAAGAGATGAATCAAGTAGAGAAAGATGCTATAGAAAGTAAGTTACAATCTTCTCTAAAGACATCTACCAGTGAATATTTAGATAAGTTTGGGGATTGGTTCGGAGTTTATCGTAAGACCGATGAGAAAGATGATGTTTATAGAGCAAGAATTATAAAATATTTACTCTTGAAAAGAGGAACTAATAATGCTATAATAGATGCTATAAAAGATTATTTAGGTAGAGATGATATTGATGTAAGTGTATATGAACCTTTTACAAATATTTTCTATACTAACAAATCACATTTAAATGGTGAAGACCACTTAATGGGATACTATTATAGATTTGCTGTTATTAATGTCTCTATAGGTGATTATTTCCCTGTAGAGATTATAGATGTAATTAATGAATTCAAACCTGCAGGTGTAACTCTATATGTCACTTATGATGGGGCTTCTACTATTAGAGGTGGAGCAATTATTAAGTGGTTAGATGGGTTACCTAAAATAGAAACATACCAAGAGTTTGATAGATTTACAGGTTATGATGATACATTCTATGGTCATATTAATATGAATCAAAGTAAAGATACTGATAACAGTTCATCAGATATTTTTAAAACAAACCATAGCTTAATTAATAGTTTAGATGTTTTAACAGGTTCATCTAGTGTAGGGAGACAGTATATTAACTACGGATATGTAACATCATATGTTTATAATCCAGGTATGACATCTTCTGTAAATCAAATAAGCGCTAGTACAGAAGGTAGAGGTCAAGAAGTACCTACTGACTATTATATGTATACTAGTACTAAGAATAACAATACAGTAGAACTTAGTATGCAAACTACTTCCGGTGTGTCTTATTTATATAATAACTTTAATTTTAGGGACTATATGAGTAAATATAGACCTCAAGTAGATTTACAATCTGATGAGGCTAGAAGAATTGTATCTGATTATATAAAAGAATTAAGTATTGATTACTATCTTAGTGCTGTGATACCTCCTGATGAAAGTATAGAAATTAAACTACAAGTTTATGATTTTTCTATTAATAGATGGCTTACAGTATCAATTAATAATTTATCTTTCTATGAAAAAAATATCGGGAGCAATATAGGATATATAAAAGATTATCTAAACAGTGAATTAAATATGTTTACTAGGTTAGAGATAAATGCAGGTAAAAGAGATTCAGTAGATATTAAAGTTAATTACTTAGATTTAATGTTTTATTACTATGAACGAGGTATTTATACAATAAAACCGTATAAAGCATTAATAGAAAATTATTTAGATATATCTAGAGAGACTTATGTAGAAGCATTTAAAATAGCATCATTATCTAATGGAGATATTATAACTAAAACAGGTTTTCAGCCTATAGGGTATTTAAAACTAGTTGGTAATTATGAAAATACAATACCTAGCACAATAAATATAGTAGCTAAAGATACAGATAATAACCCTATAGAATCTAATGAATTAGATGTATATAATACAGTAGAGAATAGAAATTTATTACAATCTTATAAAGGTGTAAATACGATAGCTAGAGAAATAACTTCTACAAAAGAGTTTACTGTATCAGGATGGGCTAAAGAGATATACTCAACTAATTATCTTTCTAAAGTATTAAAACCAGGTAAAGTGTATACGTTATCTTTTGATATGGAAATAACAGGTAATGACCCAACTCTTAAATCTTATTCTGATAATCATGGTATATATTTATACAGTAATACTAAGGGAATTGTTGTTAATGGTGTTAAATCTATGGAACGTACTATAGGTAACAAAGTATCCGTAACTCAAACTTTTACAGCCCCTACTATTACTGACCATAGATTACTAATATATACTGGAAGATATACATCTGATGGTAAAGCATCAACTCCTCCAGTGTTCTTTAATACAGTTAAAATTACGGAATTAAAATTGACTGAGGGTTCTTCTAAGCTAGAGTACTCACCTGCTCCGGAAGATAAACCTAACGTAATAGAAAAAGGAATTAAATTTAATAATATCCTAACTAATATACAGACTTTAAGTATTAATTCGGATACTATCTTAAAAAATGTAACTTTATATTATTCTTACTATGGTGATAGTTGGGTAGAACTAAAGACTCTAGGAAATATTAGTACTGGAGAAACAACAGAAACCAATAACTTAATAGATTTATATGGATTACAGACAGTAGATTATTCTAATATAAATCCAATGTCTAAAGTATCATTACGTTCCATTTGGAATGTTAAGCTAGGTGAATTGAACAATCAAGAAGGTTCTTTATCTAATATGCCTAATGATTACTTTAATGCTGTATGGCAGGATATAGATAAATTATCAGATATTGAGCTAGGTTCTATGAGAATGGTTAAAGACACTGAGGGCGGAGTATTCGATGGAGCTACAGGTGAAATTATTAAGGCTACTCTATTTAATGTCGGTGCTTATACTGATTTAGATATGTTAGCCTATACTTTGACTAATTATACTGAACCGTTAACGTTAGGCTCTAGTCGATTAATAAGTGAGCTAAAAGAAGAACTACTAACATCAGAATCATTTAATGTCGATAATAGAATTAAAGTAATTGACTCAATATATGAGGAGTTACCAAATACAAGCATTATTAAAAATGGATTTGTTGAAAGAGAAGTTACAGGTTCTAAATATTTAGATTACGGTTTATATGAGCCTATAGAAGATGGTACTAGATATAAACTTATTGTCGAAGGAGAATTTAAAGATAATATAGAATTTATATCTTTATACAATTCTAACCCTAACTTTAATGAAACATTTATATATCCATCAGAGATAATTAATGGAGTTGCTGAAAAAGAATTTATTGCAAAACCATCTACTGAAGACAAACCAAGGTTAAATACAGATGTTAGAATATATATACGACCTTATGATTCAACTATCTCTAAAGTAAGAAGAGTAGAATTAAGGAAAGTTTAA

Genome Context

Genome Context

Tertiary structure

1 / 7
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate Novacek,J., Siborova,M., Benesik,M., Pantucek,R., Doskar,J. and Plevka,P. 2016 27469164 GenBank