Protein

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Genbank accession
AUV63109.1 [GenBank]
Protein name
long tail fiber subunit, distal
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKTAGQRPAASVLAEGELAINLKDRTLFTKDDSGNIIDLSISAGGNISGNITQNGDYLQNGTYNLNGNQFVYAGKYIEFLPKTAGNGAWANQHTNKAPIFTDLSSTTSTSEYHPLIKQRYKDGTFSLGTLVSEGSMKIHYIDETGTSKYWTFRRDGGFVVDSGSLTVTAGNISASGNINSASGVVSAPQINTKTIVLDTKAFGQYDSQSLVQYVYPGTGETNGINYLRKVRAKSGGTIYHEIASAQTGKSDEISWWTGNTAVNKQMGLRNDGAMVLRRSLAIGTITTDENVNNYGSAGAMGEKYIVLGDASTGLAYKKTGVYDLVGSGLSVASITPDSFRSTRKAIFGRSEDQGGTWLLPGQNAALLSVRTDIDQNNNGDGQTHIGYNSNSKFYHYFRGRGRMAVGMAEGLIVEPGILDIKTGSNTVSIRADGGISSTQRLSLQNGIFLSSDGNNNGISFKASSSIDGTKTLNWDAGTRAGQNKNTVILKAWGNSFNTSGGTDRHTVFEVSDSQGYYFYAQRTTPASGQTVGPINFKFNGTVETGHINGLGNITLSGAVIADSANIKGPLKISNANTADAFRIWNAEYGAIFRRSETSLHIIPTLKDAGENGGISNLRPLSIDLSNGFVQMHHSLSVGNTVRTNGLFAVDTSAALVAINSHSRVNANFRMQLGQSSYIDAECTDAVRPAGAGSFASQNNENVRAPFYMNIDRTDTSTYVPIVKQRYVQNNSCYSIGTLINGGNFRVHYHEGGDGSSTGVVIKDLGWEFNKNGDFYSPGKLGAGNIRIGTDGNITGGSGNFANLNTTLNRKVNSGFITYGATAGWYKFATVTMPQATSTVSITVTGGNGFNSGSFNQCAISEIVLRTGNNNPKGLNAVLYRRGLNSFRDIAWVNTSGDTYDIYVNMGTYANQLIFNYSSVDNATVQIIGAFSSAQNPVDALPETYVKGQVADVLTNLVDSGKTKRFVAESEIAINNQTGLRITSNGDKSGSNSVLFRNDGSAFYILLTDKNAADGNTTATEGDWNGKRPFQINMTSGEVTFGNNINIYGNGSITWTKAGANPRNMRIFHAGDASRGNRIEIADDTNYIAYFEKTPGGANRFVVNGATVAGVNQMNSFGININNALGGNSIAFGDNDTGIKQNGDGLLDIYANGVQTFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLTGVIYDKAEYIGGEAIETEAGIVAQTLQDVLPEAVRETEDSKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1287 AA
molecular weight: 137914,28620 Da
isoelectric point:8,37775
aromaticity:0,08780
hydropathy:-0,33994

Domains

Domains [InterPro]
DC_1954
STR
1–1286
DC_1954
IPR048390
ATT
509–633
IPR048390 IPR030392
IPR030392
CHP
1189–1246
IPR030392 Coil
AUV63109.1
1 1287
Architecture
STR
ATT
STR
STR 1-508 | ATT 509-633 | STR 634-1286 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUV63109.1
1 1287
Domain Start End Length (AA) Confidence
N-terminal 1 428 428 0,0813
Central domain 429 631 204 0,4478
C-terminal 632 1287 655 0,7227
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-428
Central
429-631
C-terminal
632-1287

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sf24
[NCBI] 		2024309 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
8487566d0f5fbc69ed14f2418ac6ec4ef2ad4ccc222cda5ec0d903055a6f39ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50