Protein

View in Explore
Genbank accession
UXQ90297.1 [GenBank]
Protein name
internal virion protein A
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLCGSEELGQAPYIHLINRDENEQYYAVFTGSSIRVFDLAGNEKDVRYPTDGATYIQTNNPRNDLRMVTVADYTFVVNRNIRVTKNTDTVNLAGFNPKKDALINVRGGQYGRTLQIQINGGTQASYQIPDGSQPGHVNNTDAQWLAEELARQLRANLQGWTINVGQGYIHITADANGEINSLVTKDGYADQLINPVTHYVQSFSKLPPNAPDGYIVKIVGDSSKSADQYYVKYDAQRKVWVETLGWNITKQLMWETMPHALVRAADGNFEFKWLDWNPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASVANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSYTSIHRFYAVQDVSSVKNAEDITAHVPNYVPNGVFSICGSGTENFCSVLSQGDPSKIFVYKFLYLNEELRQQAWSHWDFGSNTQVLACQSINSDMYIILRNDFNTFLARVSFTKNAIDLRGEPYRAFMDMKIRYTIPVGTYNDDTYETSIHLPTIYNANFSRGKITVLEDDGKITEFEQPEVGWSNDPWLRLSGNLEGRTVFIGFNIDFIYEFSKFLIKQTADDGSSSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSSTLRAGRLNLGTGQYRFPVVGNAKYNTVYIASSETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89617,02820 Da
isoelectric point:5,45441
aromaticity:0,11950
hydropathy:-0,40088

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
UXQ90297.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UXQ90297.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9918
Central domain 141 349 210 0,1638
C-terminal 350 795 445 0,1982
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenP_WX2
[NCBI] 		2973500 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXQ90297.1 [NCBI]
Genbank nucleotide accession
OP219460 [NCBI]
CDS location
range 14247 -> 16634
strand +
CDS
ATGGCACTCATTAGCCAATCAATTAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCCGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAACGTCCACCTATGGTTTTCCTGAAGACCCTTTGTGGTAGTGAAGAGTTGGGCCAAGCACCCTATATACACCTGATTAACCGAGATGAGAACGAACAATATTACGCTGTGTTCACTGGCAGTAGTATCCGTGTGTTTGACCTTGCTGGTAACGAGAAGGATGTTCGCTACCCTACAGACGGTGCTACTTATATCCAGACAAACAATCCTCGTAATGACCTGAGAATGGTTACGGTTGCCGACTACACTTTCGTTGTGAACAGGAACATCCGTGTAACCAAGAACACTGACACTGTGAACCTAGCTGGGTTCAACCCGAAGAAAGATGCACTGATTAACGTGCGCGGTGGACAATATGGTCGCACACTTCAGATTCAGATTAACGGGGGCACTCAGGCCAGTTATCAGATTCCCGATGGCTCCCAGCCGGGACACGTAAACAATACCGATGCTCAATGGTTAGCGGAGGAACTCGCTCGCCAGCTAAGAGCAAACCTTCAAGGGTGGACCATCAATGTGGGTCAAGGCTATATACACATTACGGCAGACGCTAACGGGGAGATTAACTCCTTGGTAACAAAAGATGGGTATGCAGACCAGTTAATTAACCCTGTAACTCACTACGTTCAGTCGTTCTCGAAGTTGCCACCCAACGCGCCTGATGGGTACATTGTGAAGATCGTAGGGGATTCCTCTAAGTCTGCCGATCAGTATTATGTCAAATACGATGCCCAACGCAAGGTATGGGTAGAGACATTAGGGTGGAATATTACCAAACAGCTGATGTGGGAGACAATGCCCCACGCTCTTGTCCGTGCCGCTGATGGGAACTTTGAGTTCAAGTGGCTTGATTGGAATCCTAAGACCTGCGGCGACGATGATACCAACCCGTGGCCCTCCTTCATGGACTCCACAATCAACGATGTGTTCTTCTTCCGCAATCGCTTGGGGTTCCTTAGTGGTGAGAATATCATATTAAGTCGCACAGCCAAGTATTTCAACTTTTACCCAGCGTCCGTAGCGAACTTGAGTGATGATGACCCTATTGATGTTGCTGTGAGTACCAACAGGATAGCAATCCTTAAGTACGCCGTTCCGTTCTCAGAGGAGTTACTAATCTGGTCCGATGAGGCTCAATTTGTCCTGACGGCATCTGGTACACTCACATCACGTTCCGTTGAGTTGAATCTAACTACTCAGTTTGATGTGCAGGACCGAGCGAGGCCGTTCGGGATTGGGCGTAACGTGTACTTTGCGAGTCCGAGGTCCAGCTATACATCTATCCATAGGTTCTACGCTGTGCAAGATGTTAGTTCCGTTAAGAATGCTGAGGACATTACAGCTCACGTTCCGAACTACGTCCCTAACGGTGTATTCAGTATATGCGGGTCCGGTACTGAGAACTTCTGTTCTGTCTTATCACAAGGAGACCCAAGTAAAATCTTCGTGTACAAATTCCTGTACCTCAATGAGGAGTTACGGCAACAGGCATGGTCACACTGGGACTTTGGGTCAAACACACAGGTTCTAGCCTGTCAGTCTATCAACTCGGACATGTATATTATCCTGCGTAACGATTTTAACACGTTCCTAGCAAGGGTATCCTTTACGAAGAACGCTATTGACTTACGGGGCGAGCCTTATCGTGCCTTTATGGACATGAAGATTCGATACACGATTCCAGTGGGGACGTATAACGACGACACTTATGAGACCTCTATTCACTTACCTACCATCTACAACGCTAACTTCTCTAGAGGGAAGATTACCGTTCTGGAGGATGATGGTAAGATTACCGAATTTGAACAACCTGAGGTTGGTTGGAGTAATGACCCTTGGTTGCGACTAAGTGGTAACTTAGAGGGTCGAACTGTGTTCATCGGGTTCAACATTGACTTCATCTATGAGTTCTCCAAGTTTCTCATCAAGCAGACTGCTGACGATGGGTCTTCCTCAACGGAAGACATTGGTCGCTTACAGTTACGCAGAGCATGGGTGAACTACGAAAACTCTGGTACGTTCGATATTTATGTTGAGAACCAATCGTCAAACTGGAAGTACACCATGGCTGGTGCTCGTCTAGGATCTAGCACACTGAGGGCTGGGAGACTTAACCTAGGGACCGGACAGTATCGCTTCCCTGTAGTTGGTAACGCTAAGTACAACACTGTGTACATTGCATCTTCAGAGACTACCCCATTGAATATCATTGGGTGTGGTTGGGAAGGCAACTACTTACGGAGAAGCTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
767ad9bb2d180a586eaf44d9d54d76544170e4d245b44622f0ecc1f2fd761fa0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50