Protein

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Genbank accession
ANJ65877.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK
Physico‐chemical
properties
protein length:238 AA
molecular weight: 26795,80940 Da
isoelectric point:5,79533
aromaticity:0,10084
hydropathy:-0,56134

Domains

Domains [InterPro]
IPR009017
STR
1–145
IPR009017 IPR009017
G3DSA:2.40.155.10:FF:000003
Unmapped
1–238
G3DSA:2.40.155.10:FF:000003
IPR009017
STR
2–228
IPR009017
IPR000786
Unmapped
3–27
IPR000786 IPR000786 IPR000786 IPR000786 IPR000786 IPR000786 IPR000786 IPR000786 IPR000786 IPR000786 IPR000786
IPR011584
STR
17–204
IPR011584
ANJ65877.1
1 238
Architecture
STR
STR 1-238
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANJ65877.1
1 238
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0847
Central domain 11 209 200 0,0509
C-terminal 210 238 28 0,9915
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-238

Taxonomy

  Name Taxonomy ID Lineage
Phage Stx converting phage vB_EcoS_ST2-8624
[NCBI] 		1792289 Uroviricota > Caudoviricetes > Sepvirinae > Traversvirus ST28624 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANJ65877.1 [NCBI]
Genbank nucleotide accession
KU238070 [NCBI]
CDS location
range 22288 -> 23004
strand +
CDS
ATGAGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTGAATTAGATGGTGATGTTAATGGGCACAAATTTTCTGTCAGTGGAGAGGGTGAAGGTGATGCAACATACGGAAAACTTACCCTTAAATTTATTTGCACTACTGGAAAACTACCTGTTCCATGGCCAACACTTGTCACTACTTTCTCTTATGGTGTTCAATGCTTTTCCCGTTATCCGGATCATATGAAACGGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTACAGGAACGCACTATATCTTTCAAAGATGACGGGAACTACAAGACGCGTGCTGAAGTCAAGTTTGAAGGTGATACCCTTGTTAATCGTATCGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTCTCGGACACAAACTCGAGTACAACTATAACTCACACAATGTATACATCACGGCAGACAAACAAAAGAATGGAATCAAAGCTAACTTCAAAATTCGCCACAACATTGAAGATGGATCCGTTCAACTAGCAGACCATTATCAACAAAATACTCCAATTGGCGATGGCCCTGTCCTTTTACCAGACAACCATTACCTGTCGACACAATCTGCCCTTTCGAAAGATCCCAACGAAAAGCGTGACCACATGGTCCTTCTTGAGTTTGTAACTGCTGCTGGGATTACACATGGCATGGATGAGCTCTACAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
347e02c03a7d41ff2047c5fb1f9d1877a9faeb6f3cb9b044c23744980e8a1f1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Interplays between Shiga toxin-converting bacteriophages: plausible roles of RNA polyadenylation, oop RNA and the exo-xis region Gasior,T., Los,J.M., Nowicki,D., Licznerska,K., Dydecka,A., Bloch,S., Topka,G., Los,M., Wrobel,B., Nejman-Falenczyk,B., Szalewska-Palasz,A., Wegrzyn,G. and Wegrzyn,A. 2017-08-25 — GenBank