Protein

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Genbank accession
YP_009887530.1 [GenBank]
Protein name
haemolysin-type calcium binding
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAEFKYSLDGNVITFSPSLPANTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVIYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAILVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVAAGSTPETTGGVGLGAWLSVGDASLRSELAKNDGLKHIGSCESIAELRTITGETNGQKIFLSSVLPGRNIGGGIFQWDTTSTFIDDGGCVIKPTASATGRWIRQRNYDRTPEMFGAIGDGVTDDTAAIQRMFDSGSMNTPTDIDMLYNSFRMANKYLISSEIKTCWLNRVDATGARFIVNSSITAINLASLRNGEWIGGFFDYSGVPNASLNENAVALWPLKDVDSSSYGLLQVMHAKIRCVKTSGVHTGIKISTGTGLTWQSEIEMCELSVRQGSSSMKPHGIDIEATGPSGEGGSTTLSIRKVSTQDSVNFSGTPSSAGRGGYRIWNISGVYMFECSYDFAEVSGGDMIEIFANNVEIDRFYSERVTNISAIGEDGPIRILGNNVVITNTQFTEKATSQNNSWISVYNAGNGANITLGNWMATDLPGSTPHLEFVIDMSRDLNNSLNIIGNVAISQVYGYKNRQKIFSTREKTNAGVWSLNTVTSGQGFFVLQPSSTSYEILVRGDGRDDGSLAFMGTVKAVRSRDSAAWAVKYDFINSPGMSDTTYPVTITVVDNILVFNNASTQVFNIQTKVQDIMTVSESY
Physico‐chemical
properties
protein length:1045 AA
molecular weight: 112316,83160 Da
isoelectric point:4,70237
aromaticity:0,08804
hydropathy:-0,15818

Domains

Domains [InterPro]
DC_1946
ATT
1–1043
DC_1946
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
416–481
IPR040775
YP_009887530.1
1 1045
Architecture
ATT
ATT 1-1043 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009887530.1
1 1045
Domain Start End Length (AA) Confidence
N-terminal 1 583 583 0,9979
Central domain 584 916 334 0,9918
C-terminal 917 1045 128 0,9781
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-583
Central
584-916
C-terminal
917-1045

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage heyday
[NCBI] 		2713301 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009887530.1 [NCBI]
Genbank nucleotide accession
NC_049500 [NCBI]
CDS location
range 6768 -> 9905
strand +
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTACGTTACAATCCTGATAGCGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGCTGTCTTTGGGGGGCGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGTCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATTCAAATATTCACTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAACACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAATATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCATTTATTTTAGTGTTGGTGCTGTGTTAAGTGGATATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTATACTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATATGTTACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATACTAAAAATGAATTACTCACCCATACTGATGGAAAGTATCGTTGGGATGGTACACTTCCTAAAACTGTAGCTGCTGGCTCAACACCTGAGACAACTGGCGGCGTTGGATTAGGTGCGTGGCTTAGTGTTGGCGATGCATCTCTTCGCAGTGAACTTGCTAAAAACGATGGCCTTAAACATATTGGGTCATGTGAAAGCATTGCCGAATTACGGACAATAACAGGTGAAACAAATGGACAAAAAATCTTTTTGAGCTCTGTTCTCCCTGGGAGAAATATTGGAGGAGGAATTTTTCAATGGGATACAACATCTACTTTTATTGATGATGGTGGCTGTGTCATTAAACCAACAGCATCCGCCACGGGACGTTGGATTCGTCAACGGAATTATGATAGAACCCCGGAAATGTTCGGCGCTATAGGGGATGGTGTTACCGACGATACGGCAGCCATCCAGCGTATGTTCGATTCAGGGAGTATGAACACACCAACTGACATCGATATGCTGTATAACTCATTTCGCATGGCAAATAAATATCTAATTTCATCTGAGATTAAAACATGCTGGCTTAATCGCGTTGATGCAACTGGAGCACGATTCATTGTTAACTCCAGCATCACGGCTATCAACCTAGCGAGTCTCCGAAATGGGGAGTGGATTGGTGGTTTCTTTGACTACTCTGGTGTACCTAATGCTTCTTTGAACGAGAATGCCGTGGCATTGTGGCCCCTTAAAGATGTTGACTCGTCAAGTTACGGGCTATTACAGGTCATGCACGCTAAAATAAGATGTGTTAAAACTTCTGGAGTACATACTGGCATTAAGATCTCTACTGGTACAGGGCTAACATGGCAGTCAGAGATTGAAATGTGTGAGTTGAGTGTACGTCAGGGGTCTTCGAGTATGAAGCCGCATGGGATAGATATAGAAGCAACTGGACCATCGGGCGAAGGCGGCAGTACTACGCTCAGTATACGCAAGGTTAGTACTCAGGACTCCGTGAACTTCTCAGGTACACCTTCTAGTGCGGGACGAGGTGGTTATCGTATTTGGAACATTTCAGGTGTTTACATGTTCGAGTGCTCGTATGATTTTGCTGAGGTTTCTGGTGGAGACATGATAGAAATCTTTGCTAACAACGTAGAGATAGATCGTTTCTATTCAGAGAGGGTTACTAACATCTCAGCTATTGGCGAGGATGGACCTATACGTATTCTTGGTAATAATGTTGTTATAACTAATACACAGTTTACAGAAAAAGCTACTTCACAAAATAATAGCTGGATTTCCGTATATAACGCGGGCAATGGGGCTAATATCACCCTCGGCAACTGGATGGCAACCGACCTTCCTGGGAGTACCCCTCATTTAGAGTTTGTTATCGATATGTCCCGTGACTTGAATAATAGCCTTAACATCATTGGTAATGTAGCGATTAGTCAAGTTTACGGTTACAAGAACCGCCAGAAGATATTCAGTACAAGGGAGAAAACGAATGCGGGGGTGTGGAGCTTAAACACTGTAACCAGTGGGCAGGGGTTCTTTGTGCTACAACCCAGTAGTACCTCTTATGAGATACTTGTGCGTGGCGATGGTAGAGATGACGGAAGTTTAGCGTTCATGGGTACTGTTAAAGCTGTAAGATCTAGGGACTCTGCTGCATGGGCTGTTAAGTATGATTTTATTAACAGCCCTGGAATGTCTGATACTACATACCCCGTTACTATTACCGTTGTAGATAATATATTAGTATTCAATAATGCAAGCACACAAGTATTTAATATACAGACTAAAGTTCAGGATATTATGACAGTAAGCGAGTCATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e4954e4a8cd2c4744b9695790d26e009dbd85f57992f1f4f5193fbc599f5804
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6913
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50