Protein

View in Explore
Genbank accession
ANH49085.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MPMNPDGTFSRVWKFVDRFVSGDKVTRADLDTAIDDLVEPIQQSLVADKEMADLATQVREDALSSSESSQSASQSAARAEDAENTVSQMAETVSEDRDTTRSYRDESLTAKNEAVEAKDASLNAQQASETAENGAEAARAGAEAARAGAEAARDAAIAAPSDVFASTADALSQGVVGYSGIVAGSGGTDGVFDLAFSGGGGSGAVGKFVVSGGALTSITIIFPGVNFTSAPSPDFSASAGLTGASATLLLGNVVASGRYFAVPNSNDETFIDLYQNASGVASFVTSMPSSEALKTVTKEISEIVKIGHPTSPLGAGTNTASASNFVFANPMLASGTVRKVSFFADNAGPLELAAWSKSGDVFTKQRSQTITAVAGWQEVEINLPVNSGERLGFYGNMIVSYTASALADSGGWYAGAGDSFTDASASASSRLHFTFEVWTPTRLDKAESDIAGKLDAAEFEEMESDLYDVLVQRIGSGDPVVDGSHNLSASLFALGEPVISDGVLTNFSCFTSAAGDVRVIIFDRVGDTFTISSEETVSATGGSESFSLNMPVLEGQHVGVFGTKVRFMAGETEAYGWYAGAGPTSFTDDTASKTTPLRVGFDITYKRLKDFSKTARPRAVDLPFEYGFINNTGQSLGEGSQTATSGTSPITTSQEYDNLGFAAYPTAPSEPQPATVANTQKATDRGEFPGLGAMSAIRAALLRDNDLSYQDVKSTLVVGNNAQSGRRIDQLSKGSAFYQSALAMAEAMGGYLSGKTGVVASLWTQGENDGSAGTSAESYISQMLQLAKDYDADFRAITGQSKRVPLISYQTNSSAYRYIGLAQLEASLQSPLIYMACPTYMLSYYDSVHIDSVSARILGAYYGEAIKAVVMDGEDWQPLRAVDANVLGTTITVTFNKSGLVFDTTSMPAQTNHGFSIEDDTGSAVAITSLEVRNGNQVRVTCASAPGPDWKVRYGNNSVTGKAPYGGGGGNLRDSAGNEKTFDGTPLHNWCVLFDWTL
Physico‐chemical
properties
protein length:998 AA
molecular weight: 104643,12670 Da
isoelectric point:4,50321
aromaticity:0,08617
hydropathy:-0,15862

Domains

Domains [InterPro]
DC_1164
ATT
252–308
DC_1164 IPR036514
IPR005181
ENZ
712–866
IPR005181 DC_0473
SSF52266
STR
716–868
SSF52266
ANH49085.1
1 998
Architecture
ATT
STR
RBD
ATT 252-308 | STR 632-877 | RBD 878-998
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruegeria phage 45A6
[NCBI] 		1851646 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANH49085.1 [NCBI]
Genbank nucleotide accession
KT820175.1 [NCBI]
CDS location
range 20803 -> 23799
strand -
CDS
ATGCCGATGAATCCCGATGGTACGTTCTCCCGCGTCTGGAAATTTGTTGATCGCTTCGTTTCCGGCGACAAGGTTACCCGGGCCGATCTCGATACTGCCATCGACGATCTTGTCGAGCCAATTCAGCAATCACTGGTGGCCGACAAAGAGATGGCAGACCTCGCAACGCAAGTGCGGGAAGACGCTCTGTCCAGCTCTGAAAGCAGTCAGAGCGCAAGCCAATCAGCAGCGCGGGCGGAAGACGCCGAAAATACGGTCTCCCAGATGGCTGAGACTGTCAGCGAGGACCGCGATACAACTCGAAGCTATCGAGACGAATCTCTGACGGCGAAGAACGAAGCTGTTGAGGCGAAAGACGCCTCACTGAACGCTCAACAGGCATCAGAAACAGCGGAAAACGGCGCGGAGGCCGCGCGAGCAGGCGCGGAGGCCGCGCGAGCAGGCGCGGAGGCCGCGCGGGATGCAGCTATTGCTGCGCCCTCCGATGTATTCGCATCAACAGCAGACGCGCTTTCACAGGGCGTCGTTGGATATTCCGGTATTGTAGCCGGCAGCGGCGGCACAGATGGCGTATTTGATCTTGCATTCTCTGGCGGTGGCGGTTCTGGGGCGGTCGGAAAATTTGTCGTTTCAGGCGGCGCCCTGACTTCAATCACGATCATCTTCCCAGGCGTCAATTTCACCTCGGCACCGTCGCCTGATTTTTCTGCATCCGCTGGCCTCACAGGAGCTTCTGCAACGCTGTTGCTGGGAAATGTCGTGGCATCCGGCCGTTACTTCGCGGTGCCGAATTCCAATGATGAGACTTTCATCGACCTATATCAAAACGCATCTGGAGTCGCGTCATTCGTGACCTCAATGCCCAGCAGCGAGGCCTTGAAAACCGTGACTAAGGAAATCTCTGAGATTGTCAAAATTGGCCACCCGACATCTCCCTTGGGAGCAGGAACAAACACCGCTTCTGCATCTAACTTTGTTTTTGCCAACCCGATGTTGGCTTCCGGAACCGTTCGGAAAGTGTCCTTTTTTGCGGACAATGCCGGTCCGCTAGAACTCGCTGCATGGAGCAAATCTGGCGATGTCTTTACGAAACAGCGCAGCCAGACAATTACGGCGGTTGCCGGATGGCAGGAAGTGGAAATCAATCTTCCCGTGAATTCGGGTGAACGCCTTGGCTTCTATGGCAACATGATCGTTTCCTACACAGCATCCGCTCTGGCCGATAGCGGCGGGTGGTACGCTGGAGCTGGGGACAGCTTTACAGATGCTTCGGCGTCTGCCTCAAGCCGTCTTCATTTCACGTTCGAAGTGTGGACCCCCACACGGTTGGATAAAGCTGAAAGCGACATCGCCGGAAAGCTGGACGCCGCAGAATTCGAAGAAATGGAAAGCGATCTCTATGATGTGCTGGTGCAAAGAATCGGTTCTGGAGATCCTGTTGTTGACGGGTCGCACAATCTCTCCGCTTCGCTGTTTGCGCTCGGAGAACCGGTCATTTCTGACGGTGTTTTGACGAACTTCAGCTGCTTCACCAGTGCCGCTGGCGATGTTCGCGTTATCATTTTTGATCGTGTCGGCGACACATTCACCATTTCGTCGGAGGAAACCGTTTCTGCCACCGGTGGCTCTGAAAGCTTCTCGCTCAACATGCCCGTGCTTGAGGGCCAACATGTTGGCGTGTTTGGCACGAAGGTGCGCTTCATGGCTGGGGAAACAGAGGCATATGGTTGGTATGCTGGAGCTGGCCCAACCTCCTTCACCGATGACACGGCTTCAAAAACCACACCTCTGCGTGTCGGTTTCGACATCACGTACAAACGGCTGAAGGATTTTTCCAAGACTGCTCGGCCCCGTGCCGTCGACCTGCCGTTCGAATACGGTTTTATCAACAATACTGGCCAGTCGCTCGGCGAGGGTTCACAGACGGCGACGAGCGGAACGTCTCCGATCACTACCTCTCAGGAATATGACAACCTTGGGTTTGCAGCCTATCCGACAGCGCCGAGCGAGCCTCAACCGGCGACCGTCGCAAACACTCAGAAAGCAACTGACCGTGGTGAATTCCCTGGTCTTGGTGCCATGTCAGCAATTCGAGCCGCGCTGCTTCGTGACAACGATCTTTCGTATCAAGATGTAAAGAGCACCTTGGTTGTGGGAAACAATGCGCAAAGCGGCCGCCGTATCGACCAGCTAAGCAAGGGGAGCGCTTTCTACCAATCCGCCTTGGCGATGGCCGAAGCCATGGGCGGCTACCTGTCTGGTAAGACGGGTGTGGTTGCCAGCTTGTGGACACAAGGCGAAAATGACGGCTCAGCAGGAACGAGCGCTGAAAGCTACATCTCGCAGATGTTGCAGTTGGCCAAGGACTATGATGCTGATTTTCGGGCGATCACTGGCCAATCCAAGCGAGTGCCGCTGATTTCTTACCAGACCAACTCCAGTGCATACCGCTATATTGGCTTGGCCCAACTGGAGGCGTCCCTCCAAAGCCCGTTGATCTATATGGCGTGCCCCACCTACATGTTGTCGTACTACGACAGCGTTCATATCGACAGTGTTTCGGCTCGGATTCTTGGGGCCTATTACGGCGAAGCGATCAAGGCTGTTGTGATGGATGGCGAGGATTGGCAGCCACTGCGTGCGGTGGACGCAAATGTCCTAGGGACAACTATCACCGTCACATTCAACAAGTCTGGCTTGGTGTTCGATACCACTTCAATGCCGGCACAAACGAACCATGGGTTCTCGATCGAGGACGACACCGGTAGCGCGGTTGCGATCACTTCTTTGGAGGTTCGCAACGGCAATCAGGTGAGAGTTACTTGTGCGTCAGCGCCGGGTCCGGACTGGAAAGTCCGCTATGGCAACAACAGCGTGACAGGGAAAGCTCCATACGGTGGTGGTGGCGGGAACCTCCGCGACAGCGCTGGCAACGAAAAGACGTTCGACGGCACCCCGCTTCACAACTGGTGCGTGCTTTTCGACTGGACGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b2848edeb40f7cb5349da638fb5fd734d3c96dbf3fbb178aa887cdec79fe8e6c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ruegeria mobilis 45A6 Gene transfer agents (GTAs) show non-random host genome packaging enriched for mobile genetic elements McDaniel,L., Daniels,C.A., Baumgarten,S., Michell,C.T., Henderson,T., Ritchie,K.B., Paul,J. and Voolstra,C.R. 1984-01 — GenBank