Protein

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Genbank accession
YP_010650228.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MEKYMAGFGQGFVQATILSENNAVKYRISASGSCTKSTVRPYIKVQDQPISILVRPGLNVYVFNTTTLTIEETKNYMFTKEASSSNEAFVTYMDSLPAGKLAILLSEGKLNTDDALVSWFKSKNSTAWPSKFDVTNFDAAYTAFYATTKASITSEHVIFNDGVKDEPIEPLIDVVYDYYSDIGATGFPKRIFEFAEEARPTETGLAIIRLPTTELQTPLADYNLKSGDVVYFKLQLLIDTSDPSGIPTGTTRVSVRFFNETTLVSDTTIEANILNLGEWQLFERDITIPEGATGFTVYVSRQSTNDIAAARNLVMTETSRYRYPLMRASEFGVNGIRNNVLMEDVPNDELLILKNTDADDRGIVRSAEFREV
Physico‐chemical
properties
protein length:372 AA
molecular weight: 41457,19090 Da
isoelectric point:4,72658
aromaticity:0,10484
hydropathy:-0,19167

Domains

Domains [InterPro]
DC_0912
STR
1–372
DC_0912
PS52031
LEC
22–191
PS52031
IPR039477
STR
57–117
IPR039477
YP_010650228.1
1 372
Architecture
STR
STR 1-372
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010650228.1
1 372
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,5209
Central domain 140 361 223 0,5578
C-terminal 362 372 10 0,1073
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-361
C-terminal
362-372

Taxonomy

  Name Taxonomy ID Lineage
Phage Kosakonia phage 305
[NCBI] 		2863193 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kanagawavirus
Host Kosakonia cowanii
[NCBI] 		208223 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010650228.1 [NCBI]
Genbank nucleotide accession
NC_070776 [NCBI]
CDS location
range 161795 -> 162913
strand +
CDS
ATGGAAAAATATATGGCTGGCTTTGGACAGGGATTTGTCCAAGCCACTATTCTATCTGAAAATAATGCGGTGAAATACCGCATTAGTGCTTCTGGAAGTTGCACTAAAAGTACAGTTCGTCCTTACATAAAAGTCCAGGACCAGCCTATTTCTATATTAGTGCGTCCTGGACTTAATGTTTACGTTTTTAATACAACCACTTTGACTATAGAAGAAACCAAAAACTATATGTTTACAAAGGAAGCGTCTTCTAGTAACGAAGCCTTCGTAACATATATGGATTCTCTTCCGGCTGGCAAGCTAGCTATATTGTTGTCTGAAGGAAAGCTTAATACCGATGATGCTTTGGTTTCATGGTTCAAATCTAAAAATTCTACGGCATGGCCTTCTAAATTCGATGTCACTAATTTCGATGCGGCTTATACGGCGTTCTATGCGACGACTAAGGCAAGTATCACATCAGAGCATGTAATATTCAATGATGGGGTTAAAGATGAACCTATAGAGCCCCTGATTGACGTAGTGTATGATTATTATTCTGACATAGGAGCCACAGGTTTTCCTAAGAGAATATTTGAATTTGCCGAAGAAGCAAGACCGACTGAAACGGGTCTAGCAATAATTAGGCTTCCTACTACTGAATTGCAGACACCATTGGCCGATTATAATCTTAAAAGTGGTGATGTGGTTTATTTTAAACTGCAACTTCTTATAGATACAAGCGATCCTTCAGGAATCCCAACTGGAACTACTCGAGTATCAGTTAGATTTTTTAATGAAACCACTTTAGTTAGCGATACAACTATAGAAGCCAACATATTAAATTTAGGCGAATGGCAATTATTCGAAAGGGATATAACTATTCCTGAAGGAGCTACAGGCTTTACGGTATATGTGTCTCGTCAGAGTACAAATGATATTGCTGCTGCTAGAAATTTAGTTATGACCGAAACTTCTAGATACCGCTATCCTTTGATGCGTGCATCAGAATTTGGTGTCAATGGTATCAGAAACAACGTATTGATGGAAGATGTTCCGAACGATGAGCTTCTTATTCTTAAGAATACAGATGCTGATGACCGCGGCATTGTTCGAAGTGCAGAGTTTCGTGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0bbf651f58a1f5e677a47457392482c1bc26b6563e57d21a41f1a6446123bb40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Viruses That Lyse Plant and Human Strains of Kosakonia cowanii Petrzik,K., Brazdova,S. and Krawczyk,K. 2021 — GenBank