Protein

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Genbank accession
WZX11499.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVGFSGNGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCRMGSTLTNAAYPRLDGRALINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGGPYAGMNQVDMTDASWIAGELARQLQVALGPSGWSFQAGTGWILITAPANDNVRQIATKDGYADTLLNGFIYQVQTFTKLPANAPDGYIVEITGESARSGDNYWVQYDASGKVWKETAKPKIISGFNAATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFIGASINDVFFFRNRLGFLSGENVVMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGIMSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEVLQQQSFSHWELGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKVVTLGSYNIDTNLTSFDVRTAYGGTPGAESTFYTIDQQGVLIEHEARDWATNPYITFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGSFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:808 AA
molecular weight: 88845,42160 Da
isoelectric point:5,74900
aromaticity:0,11015
hydropathy:-0,27265

Domains

Domains [InterPro]
IPR058003
TTP
1–808
IPR058003
WZX11499.1
1 808
Architecture
TTP
TTP 1-808
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZX11499.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9891
Central domain 143 341 200 0,3368
C-terminal 342 808 466 0,1880
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YZU-PF-006
[NCBI] 		3140275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZX11499.1 [NCBI]
Genbank nucleotide accession
PP704628 [NCBI]
CDS location
range 25229 -> 27655
strand +
CDS
ATGGGACTCGTCAGTCAAAGCGTCAAGAACCTCAAAGGAGGTATCTCGCAACAACCAGACATCCTTCGGTTCTCCAACCAAGGTGCTCTGCAAATCAACGGGTGGTCCTCGGAGACTCAGGGTCTTCAGAAGCGGCCACCGACCACCTTCACCAAGCGCCTCCAGAACAAGGGGTTTCTCGGGACCAAGCCGCTGGTTCATCTCATCAACCGGGACGCCCAAGAGCAATACTTTGTGGGCTTCTCTGGGAACGGTCTGGCGGTCTGGGACTTGAAGGGCAACAACTACACCGTGCGTGGCTACAACGGTTACGCCAACTGCGCCAACCCTCGCACCGACCTGCGCCTCATCACCGTGGCCGACTACACCTTCGTGGTGAACCGGAACACCGTGTGCCGGATGGGATCGACCCTGACCAATGCGGCCTACCCACGGCTGGATGGTCGAGCGCTCATCAACGTGCGTGGCGGTCAATACGGTCGAACTCTGTCGATCACCATCAACGGTGACGGCACTGGGTCCAGTCCTCAAGCGTCCATTAAGATGCCCAACGGTTCTGCCGAGAAGGTGCCTGCTGGTGGTCCCTATGCGGGCATGAACCAAGTGGACATGACGGACGCCTCGTGGATCGCTGGTGAGCTGGCAAGGCAACTTCAGGTAGCTCTGGGGCCATCTGGCTGGTCGTTCCAAGCGGGCACCGGGTGGATTCTCATCACGGCACCGGCCAACGACAACGTGCGCCAGATCGCCACCAAGGACGGTTACGCTGACACCCTGCTCAATGGGTTCATCTATCAGGTCCAGACCTTCACTAAGCTACCTGCGAACGCCCCTGATGGCTACATCGTGGAGATCACTGGTGAGTCTGCCCGGTCTGGTGACAACTACTGGGTCCAGTATGACGCCTCTGGGAAGGTCTGGAAGGAGACAGCGAAGCCCAAGATCATCTCTGGTTTCAACGCTGCAACGCTCCCACACGCGCTCGTGAGGGCCGCTGATGGGCAGTTCGACTGGACGCCTCTGACGTGGGATGGACGCAACGCTGGTGACGATGACACGAACCCAATGCCGTCCTTCATCGGCGCTTCGATCAACGACGTGTTCTTCTTCAGGAACCGTCTGGGTTTCCTCTCGGGTGAGAACGTGGTGATGTCTCGGACCTCGAAGTATTTCAACTTCTTCCCGAGCAGCGTGGCGACCCTGAGCGATGATGATCCAATCGACGTGGCCATCTCGCACAACCGTATCTCGATTCTGAAGTACGCTGTGCCGTTCTCAGAGCAGCTCCTGCTGTGGTCCGACCAAGCCCAGTTCGTCCTGTCGAGCAACGGTATCATGTCGAGCAAGACCATCGAGCTGGACCTGACCACTGAGTTCGACGTGAGCGATGGTGCTCGTCCCTATGGGATCGGTCGCGGGGTCTACTTCGCAGCTCCACGGGCCTCCTTCACGTCCCTCAAGCGGTACTACGCGATTCAGGATGTCTCTGACGTGAAGTCCGCTGAGGATGTCTCTGCGCACGTTCCGAGCTACATCACGAACACCGTCCACGCGATCCACGGGTCGGGCACTGAGAACTTCGTGAGCATCCTTTCGGACGGCTCGCCAAACAAGGTCTTCATCTACAAGTTCCTGTATCTCGATGAGGTTCTCCAGCAGCAGTCCTTCAGCCACTGGGAGTTAGGTGATGCGGCAACGACCCGTGTCCTCGCAGCCTCGTGCATCGGCTCCTACTGCTACCTGATGATCGACCGCCCAGAGGGCTTGTGCCTTGAGCGCATGGAGTTCACTCAACACACCATCGACTATTCCATCGAGCCTTACCGGACCTACATGGACATGAAGAAGGTGGTCACTCTGGGTTCCTACAACATCGACACGAACCTGACTTCGTTCGACGTTCGGACTGCCTATGGTGGAACGCCGGGTGCTGAGTCCACGTTCTACACCATCGACCAACAAGGGGTTCTCATCGAACACGAGGCGCGGGACTGGGCGACCAATCCGTACATCACGTTCGTGGGCAACCGCGCTGGCGAGCAGATGGTGATCGGCAAGCAGTACACGTTCCAGTACGAGTTCAGCAAGTTCCTCATCAAGCAGACCGCTGACGATGGGTCAACCTCGACCGAGGACATTGGACGCTTGCAGCTTCGCCGTGCGTGGCTGAACTACGAGGAATCTGGTTCCTTCGAGATCAACGTCAACAACGGCTCCAGCGAGTTCGTCTACGTGATGACTGGCGGTCGCCTCGGGATTCAACGAGTCCTCGGTGAGTTGTCCGTGGGCACTGGTCAGTTCAAGTTCCCTGTGACCGGCAATGCCGTCAACCAACGTGTAACCATCACCAGCTCCAACCCGAACCCACTCAACGTGATCGGATGCGGCTGGGAAGGTAACTACATCCGCCGTTCTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8aea6ad5b82effdb50bb254f13a7068d2bf21b9fec572cd48a8aee013a1235b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50