Protein

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Genbank accession
XQW41516.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MAIYTKGTISVDASGVVTGVGTKWRDALSLIRVGATLVNLSPMKFYTISSIVSDTELRTLNGDGVAVPAGSNYVILLHDSITVDGLAQDVAETLRYYQSSESEIAQGLDIIKDFDWARFEQIENTTVAAAATATQANTDAQQAKTDAQQANTNAQAASQAASSASSAANQAKADAVTAKGESEAARDLSKQYADSINPALLLAKANNLSDLQSAITARSNLGLGNSATRNIGTGPGNVATGDDARIVGSAQKASNLSDLSDVSAARTNLDVYSKSQVYTKSEVDSSVIYLPWNDPSISAIFNIPITSAGDELMVRLTPTYAHFYGIVRKVFDSANTGLFTVTSLPPGKTSVKTAHSVCYLTGGGVSGLNANIIAQQGGGAGTVIRIVTPTTAAAAAIVDIKIFFS
Physico‐chemical
properties
protein length:405 AA
molecular weight: 42001,29510 Da
isoelectric point:5,05801
aromaticity:0,05926
hydropathy:0,00765

Domains

Domains [InterPro]
DC_1200
STR
1–399
DC_1200
Coil
Unmapped
133–160
Coil
XQW41516.1
1 405
Architecture
STR
STR 1-399 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage YP10S2
[NCBI] 		3401080 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia ruckeri
[NCBI] 		29486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQW41516.1 [NCBI]
Genbank nucleotide accession
PV092591.1 [NCBI]
CDS location
range 48637 -> 49854
strand -
CDS
ATGGCAATTTATACGAAAGGCACAATTTCTGTTGATGCCTCCGGCGTAGTCACTGGAGTTGGCACAAAGTGGCGCGATGCCCTTTCACTGATCCGAGTTGGTGCAACGCTGGTTAATCTTTCACCAATGAAGTTTTACACTATCTCGTCAATTGTTAGTGATACAGAGTTGCGCACTCTAAACGGTGACGGCGTGGCGGTTCCGGCTGGAAGTAATTACGTGATCCTACTGCATGACTCAATCACGGTTGATGGCCTGGCGCAAGATGTTGCGGAAACTCTGCGTTATTATCAGTCATCAGAGTCTGAAATCGCCCAAGGCCTTGACATTATAAAAGATTTTGATTGGGCGCGATTCGAGCAAATAGAAAATACAACCGTGGCGGCGGCGGCTACTGCGACCCAAGCAAACACTGACGCACAACAAGCAAAGACTGACGCACAGCAAGCTAACACAAACGCTCAAGCAGCAAGCCAGGCGGCATCATCTGCATCATCAGCCGCAAACCAGGCGAAAGCTGATGCGGTTACGGCAAAGGGTGAATCTGAGGCTGCTCGTGATTTGTCAAAGCAGTATGCTGATTCAATTAATCCGGCGCTACTGCTGGCAAAGGCTAATAACCTTTCTGATCTTCAAAGCGCTATAACGGCAAGATCAAACTTGGGGCTTGGAAATTCAGCGACAAGAAACATTGGTACCGGACCTGGGAATGTTGCTACTGGTGACGATGCGAGGATTGTTGGCTCTGCTCAAAAGGCAAGCAACTTATCAGATCTTTCTGACGTTTCGGCGGCTAGAACAAACCTTGACGTTTATTCTAAATCTCAGGTATATACAAAATCAGAGGTAGATTCAAGCGTCATCTATTTACCATGGAATGATCCTTCAATATCTGCAATCTTTAACATTCCAATTACGTCTGCTGGCGATGAATTAATGGTTCGTCTTACTCCAACTTACGCGCACTTTTACGGAATAGTAAGAAAAGTATTTGATTCCGCCAATACTGGATTATTCACAGTAACATCCTTGCCACCAGGAAAAACTAGTGTAAAAACAGCACATAGTGTTTGCTACCTAACGGGAGGTGGAGTAAGCGGTCTTAATGCAAATATCATCGCACAGCAAGGAGGTGGTGCGGGAACTGTTATTAGAATAGTTACACCAACTACCGCCGCGGCTGCTGCAATTGTTGACATTAAAATATTCTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
46352da6753734b6d4f19f16c4645ee227690f651c197b0b86306554aeca6013
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of YP10S2 bacteriophage Altinok,I., Ozturk,R.C., Ture,M., Ustaoglu,D. and Cebeci,A. 2023-03-01 — GenBank