Protein

View in Explore
Genbank accession
AYP28604.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MQIWIHDKSMRKVCALNNNVPDMLPYSSSQWHTYLEYSTSTFDFTIPKIVNGKLHDDIKYINDQMFVSFYFDNSYHVFYVSQLVENDFSFQVTCNNTNLELAAEMSRPLASVDGPKTLEWYLRNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTMKRFIIDIYQEADKNHHGIGKVRGDVILYYQSGLKGVQVTSDKTQLFNAGVFTGANGVNLDSVEFEEKNELGQVEFYSRKGTSFVFAPLSRERYPSTMNPDSADNWTRRDFQTEYKDVESLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPANNSVVFTNFKKLDNKPSDALQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPILKQGDKIVDATYRFVIDGTIKYVGMTYDVVASEINQPTTLTISAWVDNKEVASEEVTFVNVSDGKQGPKGDDGKTTYFHTAWSYSADGKDRFTTVYPNLNLLDGTRDFSGNWENGGEWTNDGTYKGLVVKKRVWKWAGIYKTFTAPKDGKYTFSAYVKSSGNAANIIRFVALNGVDLYSSIRYFDNNFDWLRDSFTITLKAKDTIVAKYEIAGSGTDSILWTAGHKWEEGSVATPWMPSASEVKTADYPSFIGHYTDYTQADSPNPQDYTWSLIRGNDGIPGPKGADGRTPYVHFAYADSADGQKGFSLTQTGSKRYLGVLTNFIKEDSTNPADYTWSDAAGSISVGGRNLLVKTNQGITNWDWTMSNGDKSVEEVNIDGIRAVKLTKGTKTANTGWNYIQYRGLLRKLIRPNTKYTLSFDVKPSVDVSFSATLIRGNRKAELTDTVLMNKALANQWTKVSCVLTSKETLSGDLNQVVYLAGMPTTNGNWVIIKNIKLEEGDIPTQWTPAIEDIQDEIYSKADDVLTQAQLNRLNEMDSIIKAELYARASLDTLNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMAASNEGLVVGKKDKSSSIMFNPNGRISMFSAGNEVMYISKGVINIENGIFSKTIQIGRYREEQDLLNPDRNVIRYAGGA
Physico‐chemical
properties
protein length:1114 AA
molecular weight: 125323,73810 Da
isoelectric point:5,46975
aromaticity:0,11221
hydropathy:-0,45718

Domains

Domains [InterPro]
DC_0002
STR
1–679
DC_0002 G3DSA:2.60.120.260 Coil
IPR010572
ENZ
142–381
IPR010572 DC_0921
IPR008983
RBD
569–635
IPR008983 IPR008979
AYP28604.1
1 1114
Architecture
STR
STR 1-1113 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SW7
[NCBI] 		2483879 No lineage information
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP28604.1 [NCBI]
Genbank nucleotide accession
MH973662.1 [NCBI]
CDS location
range 15619 -> 18963
strand +
CDS
ATGCAAATTTGGATTCATGATAAAAGCATGCGCAAGGTGTGTGCTTTAAACAACAACGTTCCTGACATGCTTCCATACTCGAGCAGTCAGTGGCACACCTACCTTGAATACTCAACCAGTACATTTGACTTTACGATTCCTAAAATTGTAAATGGAAAACTTCACGATGATATTAAATACATCAATGATCAGATGTTTGTATCATTCTATTTTGACAATTCCTATCACGTTTTCTATGTATCGCAACTCGTTGAAAATGATTTTAGTTTTCAAGTCACTTGTAATAATACTAACTTAGAATTAGCAGCAGAAATGTCGCGTCCTTTAGCCAGTGTTGATGGTCCTAAAACCCTTGAGTGGTATCTTCGGAATCTTGAATTGCTTGGTTTTGCAGGACTTGAAATAGGTGTCAATGAAATTTCTGATAGAACAAGAACGCTTACTTTTGAATCGCAAAGTGGCACAAAGCTAGAACAACTTCATAGCTTGATGAATCAATTTGATGCTGAATTTATTTTTCGTACCGAATTAAACCGAGACGGAACTATGAAACGTTTCATCATCGACATCTACCAAGAAGCAGATAAAAACCATCACGGAATTGGAAAGGTTCGAGGAGATGTCATTCTCTACTATCAAAGCGGTCTGAAAGGCGTTCAAGTAACTAGTGATAAGACACAACTGTTTAATGCTGGTGTTTTCACTGGTGCAAACGGGGTTAATCTTGATAGCGTTGAGTTTGAAGAAAAAAATGAGTTAGGACAAGTAGAGTTCTATTCTCGAAAGGGCACTAGCTTCGTTTTCGCCCCACTATCAAGGGAACGCTACCCATCTACCATGAATCCAGACAGCGCTGATAACTGGACACGTAGGGACTTTCAAACAGAATACAAGGACGTTGAATCCTTAAAAGCTTACGCCTTGCGTACTATCAAGCAGTATGCTTATCCACTAATGACATATACCGTAAGTGTTCAATCTAGTTTCATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTGCGAATAATTCAGTAGTTTTCACCAACTTTAAAAAGTTGGATAATAAACCATCGGATGCCTTGCAACAACGTATCGATGAGATTGTTTCTAAGTCACTGCCATATCATGTTGAGATAAGGACCACGAATGGAACAGTATTTAAGAACGGCATTGGTCGTTCTACTGTTAAACCAATTTTGAAACAAGGCGATAAAATTGTTGATGCAACTTATCGATTTGTGATTGACGGTACTATTAAATATGTAGGTATGACCTATGACGTGGTAGCGTCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAGGGCGATGATGGGAAGACTACATATTTTCACACAGCATGGTCTTATAGTGCCGATGGTAAGGATAGATTTACAACTGTTTATCCTAATTTGAATTTGTTGGATGGTACTAGAGATTTTAGCGGTAATTGGGAAAATGGTGGAGAATGGACGAACGACGGAACCTACAAAGGCTTAGTTGTTAAAAAAAGAGTGTGGAAATGGGCAGGAATTTATAAAACATTCACAGCACCTAAAGACGGAAAATACACTTTCTCAGCTTATGTTAAAAGTTCAGGAAATGCAGCAAATATAATTAGATTTGTGGCCCTTAACGGTGTGGATTTATACTCTTCAATAAGGTACTTTGATAATAACTTTGATTGGCTTAGAGACAGTTTTACTATAACTCTGAAAGCCAAGGATACCATTGTGGCCAAATATGAAATAGCTGGTTCTGGAACAGATTCAATTCTATGGACGGCTGGGCATAAGTGGGAAGAGGGTTCAGTCGCTACCCCTTGGATGCCCTCGGCTAGCGAAGTCAAAACTGCTGACTATCCAAGTTTCATCGGACACTACACAGACTACACGCAAGCAGATAGTCCTAACCCTCAAGATTACACTTGGAGTCTCATTCGAGGGAATGATGGTATTCCTGGTCCTAAAGGTGCGGACGGACGAACGCCTTACGTGCACTTCGCTTATGCCGATAGTGCCGATGGTCAAAAGGGTTTCAGTTTGACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACAAACCCAGCAGATTATACATGGAGTGACGCTGCTGGTAGCATTTCGGTTGGTGGTCGGAACTTACTTGTAAAAACCAATCAAGGTATTACTAATTGGGATTGGACGATGTCGAATGGTGACAAGAGCGTTGAAGAAGTCAATATTGATGGTATTCGTGCTGTTAAATTAACCAAAGGTACAAAAACAGCAAATACTGGTTGGAACTACATTCAATATCGAGGTTTGTTGCGTAAACTCATACGACCAAACACAAAGTACACTCTTTCTTTTGATGTAAAACCAAGTGTTGATGTAAGTTTTTCAGCAACGCTAATAAGAGGCAACCGCAAAGCTGAATTGACTGATACTGTCCTTATGAATAAAGCTTTGGCAAATCAATGGACTAAAGTATCATGTGTTCTGACAAGTAAAGAAACGTTATCAGGTGATTTAAATCAAGTTGTCTACTTGGCAGGTATGCCAACAACAAACGGTAATTGGGTAATAATTAAGAATATCAAACTCGAAGAAGGTGACATACCTACTCAGTGGACACCTGCAATTGAGGACATACAAGATGAAATTTATTCCAAGGCAGACGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAATGGACTCTATTATTAAAGCTGAATTATACGCTAGAGCGTCGCTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTGTTGGTAAAAAAGATAAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGTTCTCAGCTGGGAACGAGGTAATGTACATTTCAAAAGGTGTCATCAATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGCAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2403e3c0d279295bab6584221a1dc03d35cc72b27184b5e799bbeacff7ee03a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7380
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank