Protein

View in Explore
Genbank accession
XUS44883.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSPLAASIERSLQLKLADVINIKDFGAVGDGELHPLSEKFSTLSAAQMVYPFVTSLTQSQDYAGTQAAINAAKVGYAVFSPSGKYEINKSIQVDYALCMYGEGAQGLRTVASVHSPSPVRGTVFNSHVATGRMLSIDSGSAYCFGLTLRDFAIWGVDGQCDVGLYLNGIGWMGIVEGVNIQFFPNQALEIGYIQDTYFTNCSFLQSGNVTNPAVTMIQDSNYVYFTGCHFEFNPYMLKFGNPWFVFFNHCHFEVARPVGDNTLADRFYYTKAPIDLGASHEVFFSNNVFIPTDVAYLASKLGIPRKDVPYFITGTGSVMSFTGDVFLAPEGTIKPAYLSGSDIDFNGVKFIRCDPSNYGLVVQGGKVTNCTYGIDATVDSTNLWGIQVINGSVTDNKFGFYENDSNGRRTAGGLIVGGAHCSGNEIPIDSRVNIYLDSGATVNGFDGGKPFFVDVTAAGDIDLTKLHPAANLRITGAAVSIFHVYGSPYGRDLMIASNTADGVVKFASNNLIPKGSVDYPIPQYHHTLWKCIYDGSATLYQIS
Physico‐chemical
properties
protein length:543 AA
molecular weight: 58723,50450 Da
isoelectric point:5,24251
aromaticity:0,12523
hydropathy:0,05120

Domains

Domains [InterPro]
IPR012334
STR
1–293
IPR012334
DC_1709
STR
2–540
DC_1709
IPR011050
STR
62–293
IPR011050
XUS44883.1
1 543
Architecture
STR
STR 1-540 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUS44883.1
1 543
Domain Start End Length (AA) Confidence
N-terminal 1 60 60 0,9825
Central domain 61 448 389 0,9937
C-terminal 449 543 94 0,9820
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-60
Central
61-448
C-terminal
449-543

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Jgk1
[NCBI] 		3410910 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUS44883.1 [NCBI]
Genbank nucleotide accession
PV292302 [NCBI]
CDS location
range 64528 -> 66159
strand -
CDS
ATGTCCCCATTGGCTGCATCAATTGAACGTAGTCTCCAGCTTAAACTGGCGGATGTAATTAATATCAAGGACTTCGGTGCTGTAGGGGATGGTGAACTACACCCATTAAGTGAAAAGTTTAGCACCCTATCTGCTGCACAAATGGTATATCCATTTGTAACTAGCTTAACTCAGAGCCAAGATTATGCAGGTACGCAGGCAGCAATCAATGCTGCTAAGGTGGGTTATGCTGTATTTTCTCCATCTGGTAAGTATGAAATTAATAAATCTATTCAGGTGGATTACGCTCTGTGCATGTATGGTGAGGGTGCTCAAGGTTTGAGGACTGTAGCTTCTGTACATTCCCCTTCCCCTGTACGAGGTACAGTATTTAACTCCCATGTAGCAACTGGTCGAATGTTATCTATTGATTCTGGTTCGGCTTACTGCTTTGGACTTACCTTACGTGATTTTGCTATTTGGGGGGTTGATGGTCAGTGTGATGTGGGTTTGTATCTTAATGGTATTGGTTGGATGGGTATTGTTGAGGGAGTTAACATACAATTCTTCCCGAACCAGGCACTAGAAATTGGGTACATTCAGGATACCTATTTTACTAACTGTTCTTTCCTACAAAGCGGTAATGTTACTAACCCTGCTGTGACCATGATTCAGGATAGTAACTACGTATACTTCACTGGTTGTCATTTTGAGTTTAATCCCTACATGCTTAAATTTGGTAACCCATGGTTCGTGTTCTTTAATCACTGTCACTTTGAGGTTGCTAGACCTGTTGGTGATAACACCCTAGCTGACCGTTTTTACTATACCAAGGCTCCTATTGATTTGGGCGCAAGTCATGAGGTGTTCTTTAGTAACAACGTATTCATTCCTACGGATGTTGCTTACCTGGCTAGTAAGTTGGGGATTCCTCGTAAGGATGTACCGTATTTCATTACTGGTACTGGTAGTGTTATGAGTTTTACCGGGGATGTATTCCTAGCTCCAGAAGGCACTATCAAACCTGCATACCTATCTGGTTCAGACATTGACTTTAACGGGGTTAAGTTCATTCGTTGTGACCCATCTAATTATGGGTTGGTTGTTCAAGGTGGTAAGGTTACTAACTGCACCTATGGTATTGATGCTACAGTAGATTCCACTAATCTCTGGGGTATCCAAGTGATTAATGGTTCGGTAACAGATAATAAGTTTGGGTTCTATGAGAACGATTCCAATGGAAGACGTACCGCTGGTGGTCTGATTGTAGGTGGTGCACATTGTTCAGGTAATGAGATACCTATTGATTCCCGTGTTAACATCTATCTGGATTCTGGTGCTACAGTTAATGGTTTTGACGGTGGTAAGCCATTCTTTGTTGATGTTACTGCTGCTGGAGATATTGACCTCACTAAGTTGCACCCTGCTGCAAATCTCCGAATTACCGGAGCTGCTGTCAGCATTTTTCATGTGTATGGTTCCCCGTATGGTAGGGATTTAATGATAGCGTCTAATACAGCCGATGGGGTTGTTAAGTTTGCTTCTAATAACCTAATCCCTAAAGGTTCCGTAGATTATCCTATACCACAGTATCACCATACGCTGTGGAAGTGCATCTATGACGGTTCAGCAACCTTGTACCAGATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1724248ada73085b85d1f4db20c2f26116a54bcdf827757bda7599e6cbc0a202
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50