Protein

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Genbank accession
XPK40168.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MSRELMPKSGIMMPHVVVTRDAAVVGVSTVDGVAGAVNLTDKYLQKSDAEATYQTKAEGATKQYVTDAINPIMTNALFKDDPFVNNDTPIRSGGGNGVESVDMIKVTPENSIKLGSYASSVQGVEIHSAGRVQVVDQNDGGVETKYPIYSKRYRPEIEDLPFAAIGSYVKDSQGRTVGVTRTGINSDIKQLTQKVTFTQPVTVPDAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVTSDGQLLSRSEYPDLWAYAQLLTPISDADWLADPQKRGKYSTGDGSTTFRVPDRNGVQSGSIKELFGRGDGGSSSNNGTIYEAAAPDIGGAAAGVSQGTYAQIFGTASRGAFFADNGLYPQGQGETIPGGAGATEGRQNTLNFLASRSNATYGRYGVSDNILPRNFIGVWTIRAHGGFTAANTSWSVINSGTTVPPPNAVVYGGQVSSEYRVNGALRVGSSIMTRYTENGEIIPIVRVTDNRTGTSSSYDRPLRDAYQVTNTGTGGRSLNIVKNNTRGWQTISCRFPVTCPPNSATNWNWNFVSEGATPFVNYPGISANGESSNSADWLVQVEGITGSQCAGFIHNKSSATLVVWVMLIAHGIIASTWEG
Physico‐chemical
properties
protein length:625 AA
molecular weight: 66391,77350 Da
isoelectric point:5,81306
aromaticity:0,08480
hydropathy:-0,31056

Domains

Domains [InterPro]
DC_1514
STR
20–338
DC_1514
SSF88874
STR
255–431
SSF88874
XPK40168.1
1 625
Architecture
STR
STR 20-431 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AidaStucki_Bas93
[NCBI] 		3398403 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK40168.1 [NCBI]
Genbank nucleotide accession
PQ850593.1 [NCBI]
CDS location
range 10263 -> 12140
strand +
CDS
ATGTCTAGAGAATTAATGCCCAAATCTGGGATAATGATGCCTCATGTGGTAGTTACTAGAGATGCCGCAGTTGTGGGTGTGTCTACAGTTGATGGCGTGGCAGGTGCTGTTAATTTAACAGATAAATATCTACAAAAGTCTGATGCTGAAGCAACATATCAAACGAAAGCAGAAGGGGCTACTAAGCAATATGTAACCGATGCTATTAACCCTATTATGACAAATGCTCTGTTTAAAGATGACCCTTTTGTCAATAATGATACACCTATCCGCTCTGGTGGCGGTAATGGTGTTGAATCAGTGGATATGATTAAAGTTACCCCCGAGAACTCTATCAAACTAGGGAGTTATGCTTCTTCTGTTCAGGGGGTTGAGATTCACTCTGCTGGTCGTGTTCAGGTTGTTGATCAGAATGATGGTGGAGTAGAAACTAAGTATCCTATCTATTCTAAAAGGTATCGTCCTGAGATTGAGGATTTGCCTTTCGCTGCAATTGGTTCTTATGTCAAGGATTCTCAAGGTCGTACTGTTGGTGTTACTCGTACAGGGATTAACTCTGATATCAAACAGCTTACTCAGAAGGTGACTTTCACTCAACCAGTTACTGTTCCTGATGCAGTTGGAGATTATGATGCAGTTACTTTGAGACAGCTTCGTAACAGTGGTGGTGGCTCTGGCGGTCCTACCATGAGCGGTATTTCTAACTTTGGTATTGGTGATTTTCATTTACGTGACAGCCGTGCTTTCATTCCCGCTTTTGAAGTAACCTCTGATGGACAGCTTCTCAGTCGTTCAGAGTATCCAGACCTTTGGGCTTATGCTCAACTGTTGACACCTATCTCGGATGCTGATTGGTTGGCTGATCCTCAGAAACGTGGTAAATACTCAACAGGTGATGGTTCTACTACTTTCCGTGTCCCTGACCGAAATGGTGTCCAATCAGGTTCAATTAAAGAGTTGTTTGGGAGAGGGGACGGAGGATCTTCCTCTAACAATGGTACAATCTACGAAGCAGCAGCGCCAGACATTGGAGGGGCAGCAGCTGGCGTATCTCAAGGTACTTATGCGCAAATTTTTGGTACAGCATCAAGAGGTGCGTTTTTCGCAGATAACGGTTTATATCCACAAGGTCAAGGTGAAACTATTCCGGGCGGAGCTGGTGCTACAGAAGGTCGTCAGAATACTCTGAATTTCCTAGCAAGTAGATCTAATGCTACTTATGGGAGATACGGTGTTTCAGATAACATCCTCCCTCGTAACTTTATTGGTGTTTGGACTATCCGTGCGCATGGTGGTTTTACGGCAGCTAACACTTCTTGGTCTGTGATTAATAGTGGCACTACTGTACCTCCACCTAACGCGGTTGTTTACGGCGGTCAAGTTTCCAGTGAGTACAGAGTCAACGGTGCACTACGTGTAGGCTCAAGCATCATGACGCGCTATACGGAAAATGGAGAAATTATCCCGATTGTTCGTGTTACTGATAACCGTACAGGTACGTCATCGTCTTATGACAGACCACTCCGTGATGCTTATCAGGTTACCAATACTGGAACAGGGGGTCGGTCACTTAACATCGTTAAAAACAATACTCGCGGTTGGCAAACTATATCGTGCCGTTTTCCTGTAACATGCCCTCCTAACTCAGCTACAAACTGGAACTGGAATTTTGTAAGCGAAGGAGCAACACCATTCGTCAACTATCCTGGGATATCGGCTAATGGGGAAAGTAGTAACTCTGCGGACTGGTTGGTTCAGGTGGAAGGTATTACAGGTAGTCAGTGTGCAGGCTTTATTCACAACAAATCATCAGCAACTTTGGTAGTATGGGTGATGTTAATCGCACACGGCATAATTGCCTCAACCTGGGAGGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d49e5df36c236905df6414e96025f26ace7062b905b7f543f18c1ef388392c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6095
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank