Protein

View in Explore
Genbank accession
YP_009785899.1 [GenBank]
Protein name
Dpo42
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVTDENRRLLSNITEYRYVSKTRVKLLVETDGFDRVEIRRLTSASERVVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPQDDAGNLDARNRRIVRLAPGVEGTDAINKNQLDTTLGDAGGILSDMKDLEGEIHDYIEKFADDTALVRGVAWVYNLGSADGGETVITINKSTRTYAVPYIEVNGSRQEVGYHYSFDLETQQITLATPLKAGDFVMVMTTESQLPVETLLASSVGASSIGTATGETVEERLTRLYGHFVHPETYGAVGDGITDDRVALQRSLDVAYENALNGTGPSTVRWSGDYMVSLNPNSLGVSGELAAGRSALCIRPGVSIEGKGTVRLDPSFTGSQSGAVITNWAGPVDDCSIKDIRIYGGKDVATGTGITGILILDSQRVVISDVKVLNSTAGGIYLRKGATEGLYGCSFSKVSGCTVDNAGYIGIQMERPYDNTVIGNTINRCEDNGIDVFGNVNDATVTGIAQSTLITGNNIRDVLNGVFIESCGNTNITGNYIADFRSSGVIYNRINSAANDNSLTSNVLIGASGASAGVSFKNSVGYCTVASNRIQNSDYGIRCVGGGITGLNILPNTMKNIAKTLLFVEARNNGLVKSRMSTQFYEGAQVGGIPSNTSPRGVPHRFPSRLSYIVDIQPFWATEQGTREDNFERAKGTLASITGWGSKCALYDTIVAGDTVVSLNSSSVAVGEYLEINAEVYKVTSVSATYAVVRKWTGSDYTAGDYAAVIISNPSYIIRRVQWGEQ
Physico‐chemical
properties
protein length:793 AA
molecular weight: 85165,21110 Da
isoelectric point:4,96599
aromaticity:0,07440
hydropathy:-0,13493

Domains

Domains [InterPro]
IPR005604
3–127
IPR005604 IPR011050
IPR012334
299–651
IPR012334
IPR039448
366–514
IPR039448 IPR006626 IPR006626 IPR006626 IPR006626
IPR006626
399–428
IPR006626 IPR006626 IPR022441
IPR006626
460–482
IPR006626 IPR006626
YP_009785899.1
1 793
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_IME205
[NCBI] 		1770232 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009785899.1 [NCBI]
Genbank nucleotide accession
YP_009785899.1 [NCBI]
CDS location
range 33550 -> 35931
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCGGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTCGTGAGGGTATCTCTCGTAACTGATGAGAATCGTCGCCTGCTGAGTAACATCACTGAGTACCGCTATGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAGACAGATGGGTTCGACCGTGTGGAAATCCGCAGGTTAACCTCAGCTTCAGAGCGTGTAGTTGACTTCAGTGATGGCTCAGTTCTCCGTGCGGCAGACCTTAACGTTTCTCAGATTCAGTCCGCACATATCGCAGAGGAAGCACGTGACGCGGCACTCATGGCCATGCCTCAGGATGATGCAGGTAACCTCGATGCCCGTAACCGCAGAATCGTTCGACTGGCTCCGGGTGTTGAAGGTACTGACGCAATCAACAAGAACCAGCTGGACACAACTCTAGGAGATGCTGGTGGTATCCTATCGGACATGAAGGACCTAGAGGGTGAGATTCATGACTACATCGAGAAGTTTGCAGATGACACTGCGCTTGTGCGTGGGGTGGCGTGGGTGTATAACCTTGGTTCCGCTGATGGTGGGGAAACCGTTATCACCATAAATAAATCGACACGTACATACGCTGTGCCTTACATTGAGGTAAATGGCTCACGCCAAGAGGTCGGGTATCACTATTCGTTCGATCTGGAAACACAGCAGATAACCCTTGCCACCCCATTGAAAGCTGGCGACTTCGTTATGGTAATGACCACAGAGTCTCAGCTCCCGGTAGAGACCTTGCTGGCATCTAGCGTTGGTGCCTCGAGCATCGGGACGGCCACAGGAGAGACAGTTGAGGAGCGACTTACTCGACTTTACGGGCACTTTGTGCACCCTGAGACGTATGGTGCTGTAGGTGATGGCATCACAGACGACCGAGTTGCACTCCAGCGCTCACTAGATGTGGCTTATGAGAATGCGCTGAATGGTACTGGCCCGTCGACTGTACGCTGGTCAGGAGACTACATGGTGTCGCTGAACCCTAACTCACTAGGCGTTTCTGGGGAACTGGCAGCAGGTCGCTCAGCACTATGTATCCGACCCGGTGTGTCAATTGAAGGTAAGGGCACGGTCCGTCTTGACCCATCCTTTACAGGAAGCCAGTCTGGCGCAGTAATAACCAACTGGGCTGGTCCAGTTGACGACTGCTCCATTAAGGATATACGGATTTACGGCGGTAAGGACGTAGCCACTGGTACTGGCATAACCGGAATCCTTATTCTGGATTCACAGAGAGTAGTCATATCTGACGTTAAGGTTCTGAACAGTACAGCTGGTGGTATCTATCTGAGAAAAGGTGCCACAGAGGGGCTGTATGGATGCTCATTCAGCAAGGTCTCAGGGTGTACTGTGGATAACGCTGGGTACATTGGAATCCAGATGGAGAGACCGTACGATAATACCGTCATTGGGAACACAATCAATCGGTGTGAAGATAACGGCATTGACGTGTTCGGTAACGTAAACGATGCTACGGTAACGGGCATTGCGCAATCCACGCTAATCACTGGCAACAACATAAGGGATGTCCTAAACGGAGTGTTCATTGAATCCTGCGGCAACACAAACATTACCGGAAACTACATCGCGGACTTTCGCTCCAGCGGGGTCATCTACAACCGCATCAACTCGGCGGCAAATGATAACTCACTCACCTCAAACGTCCTCATCGGCGCCTCAGGTGCTTCGGCAGGTGTTAGCTTCAAGAACTCAGTAGGATACTGTACAGTGGCGAGCAACAGGATTCAAAATAGTGACTACGGGATTCGATGCGTTGGCGGAGGCATTACCGGGCTTAACATCCTCCCAAATACGATGAAGAACATCGCTAAGACCCTCCTGTTTGTGGAGGCCCGTAACAACGGTCTGGTCAAGTCACGTATGTCTACCCAGTTCTACGAAGGGGCACAGGTCGGCGGGATTCCGAGTAACACCTCTCCAAGAGGAGTACCGCACAGATTCCCATCAAGGCTCTCTTATATTGTGGATATCCAACCGTTCTGGGCAACAGAGCAGGGTACCCGCGAGGATAACTTCGAGAGAGCAAAAGGGACCTTGGCGTCAATCACTGGGTGGGGTTCAAAGTGTGCCCTGTATGACACGATTGTGGCAGGTGATACGGTGGTGTCTCTTAACTCATCGTCAGTAGCTGTGGGCGAATACCTTGAGATTAACGCGGAGGTTTATAAGGTTACTAGCGTATCTGCAACTTACGCCGTTGTTCGAAAATGGACTGGTTCGGATTACACGGCTGGAGACTACGCAGCGGTAATTATTAGTAATCCATCCTACATCATTCGCCGGGTGCAGTGGGGCGAACAGTAA

DepoCatalog

K-type Target
K47
Number of Rings

13

Structural Classification
Domain Ranges
N-terminal Domain
1-304
Central Domain
305-697
C-terminal Domain
698-793
Experimentally Tested K-types
K16
K37
K47
K64
Phage Morphotype

Podo-type

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Identification of Two Depolymerases From Phage IME205 and Their Antivirulent Functions on K47 Capsule of Klebsiella pneumoniae Liu, Yannan; Leung, Sharon Shui Yee; Huang, Yong; Guo, Yatao; Jiang, Ning; Li, Puyuan; Chen, Jichao; Wang, Rentao; Bai, Changqing; Mi, Zhiqiang 2020-01-01 — 10.3389/fmicb.2020.00218