Protein

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Genbank accession
YP_009197480.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
Protein sequence
MPVIKTAARKIGDDWVTEIHDSVGTVEITYTFLEANQRDTMDFANLSGDTLTLTINATVKTVNAYQTVRVNTEKFTAFKVKSNKSSSAFRARSSYDVAVAPANLNAGTATTADVANKLNALMDQMKAAGVIK
Physico‐chemical
properties
protein length:132 AA
molecular weight: 14236,94830 Da
isoelectric point:8,92502
aromaticity:0,06818
hydropathy:-0,15152

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009197480.1
1 132
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0013
Central domain 11 121 112 0,0029
C-terminal 122 132 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-121
C-terminal
122-132

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Pavlov
[NCBI] 		1675598 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus megaterium
[NCBI] 		1404 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009197480.1 [NCBI]
Genbank nucleotide accession
NC_028782.1 [NCBI]
CDS location
range 10024 -> 10422
strand +
CDS
ATGCCAGTAATTAAAACAGCAGCACGCAAAATAGGTGATGATTGGGTAACTGAAATTCACGATAGCGTGGGAACTGTCGAGATTACGTATACATTCTTAGAAGCTAACCAGCGCGATACAATGGATTTTGCAAATTTAAGCGGTGATACCCTAACCTTAACGATAAATGCTACAGTAAAGACAGTTAACGCGTATCAAACGGTGCGTGTTAACACAGAAAAATTTACTGCTTTTAAAGTGAAATCGAATAAGAGTTCTAGTGCTTTTCGTGCTCGTTCTTCTTATGATGTGGCGGTAGCTCCTGCAAACTTAAATGCAGGAACGGCAACAACCGCAGACGTAGCAAACAAATTAAATGCCCTTATGGACCAAATGAAAGCTGCAGGGGTTATAAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
041adc9d8409f0551c8d16f8f378ee1d486bd52ee608033d89d1e95e95522219
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50