Protein

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Genbank accession
YP_009285801.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLKSGTTIGGNTIWSQANLPLLPTGNTLTYKGFKVYTENDKPTKAEIGLGNVTNDAQVKKSGDEMTGDLTLKNNTQLTVPRRINLVADTAGNAPYLLTTRSDNNAVTDPFPSQHTRTFTLFVNTKSNTSDPAGGANLAALLSHQSTTGAGSIELQAYDAPNKTTGATGILRAQIGLNGWDGSINLSGASLNVGMSTTVSGNLTGTQLITKGDGNRNVEFRDAGGNELAMIFADTGKNLYVRSGGSYVTRFAADGTLILANGLTAPRQIFVNGAGLPANNSLIRLDTSSDGNASGDGATHLGVKADDGKFYHYFRGAGTMFIDVKGGISSSTPLYMNGVDPALPKIEMLSTGAAGGKNLLRRFRGGLPDMIWHETIQGTQYRLMSGATDSSMEFFIDGNGLGRGGAIYGGTFTADAGNDGFKIRYKPATESAMFQIWNRDTSVLNSYFGYGSSNQATVNLYNRLGDIAVSTPNAAFRLDNTTLTLGNSASTAVSQRAFTIRNWGDGGFRAAVFEVNDGTGYHFYSQRRSDNLVEVAFSGDLYTNGILRAQNNIIVRGSDGVSIQADTNCHVWFRNSAGAEKAVLYAENNGSVKLRTSNQQYSLTIADGMILATGQPTTADSRGLIRGAITGGAWVDWRNRPAGLLVDCQDSYNQAYNIWKATHWGVAHLAAMGVHNGSGAPTVGLHVGGADYWWDSAGTFNAAGNGSFNDVYIRSDIRLKSNLVELKDALSKVEQLKGYIYDKKQKIEDDEPQYREAGIIAQDLQKVLPEAVSEHKDTGILTISPSSVNALLVTAINELRERLEAIERKIGA
Physico‐chemical
properties
protein length:813 AA
molecular weight: 86757,53830 Da
isoelectric point:6,34388
aromaticity:0,08118
hydropathy:-0,30443

Domains

Domains [InterPro]
DC_1159
STR
1–364
DC_1159 DC_1202
IPR030392
CHP
716–811
IPR030392
IPR030392
CHP
716–773
IPR030392 Coil
YP_009285801.1
1 813
Architecture
STR
STR
STR 1-364 | STR 398-813
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009285801.1
1 813
Domain Start End Length (AA) Confidence
N-terminal 1 406 406 0,1448
Central domain 407 605 200 0,1928
C-terminal 606 813 207 0,8874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-406
Central
407-605
C-terminal
606-813

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage vB_CfrM_CfP1
[NCBI] 		1871313 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus miller
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009285801.1 [NCBI]
Genbank nucleotide accession
NC_031057 [NCBI]
CDS location
range 173501 -> 175942
strand +
CDS
ATGGCAGATTTAAAATCGGGTACTACCATCGGCGGTAATACTATATGGAGTCAGGCGAATTTGCCTTTACTCCCAACTGGAAACACATTAACGTATAAAGGCTTTAAAGTATATACCGAAAACGACAAACCGACAAAAGCCGAAATCGGATTAGGCAACGTAACCAACGATGCACAGGTTAAGAAATCTGGCGACGAAATGACGGGTGATCTGACATTAAAGAACAACACCCAGTTAACGGTTCCTCGTCGTATTAACCTGGTTGCTGATACTGCGGGGAATGCTCCTTATCTGTTAACTACTCGTTCAGATAACAACGCGGTTACAGATCCTTTCCCGTCACAGCATACGCGCACGTTTACTTTGTTTGTCAACACAAAATCGAATACTTCCGATCCTGCTGGCGGTGCTAACCTTGCTGCTCTATTATCGCATCAGTCAACTACTGGGGCAGGTTCTATCGAACTGCAAGCATATGATGCACCAAACAAGACAACAGGCGCTACGGGCATTCTACGCGCTCAGATTGGGCTTAATGGCTGGGATGGTTCAATTAACCTTTCCGGTGCTTCGTTAAACGTTGGTATGAGTACAACGGTCAGTGGTAACTTAACAGGAACCCAACTGATCACAAAAGGCGACGGAAACCGTAACGTCGAATTCCGTGATGCTGGCGGTAACGAATTAGCGATGATATTTGCTGATACTGGTAAAAACTTATATGTTCGTTCAGGTGGTTCTTATGTAACACGTTTCGCTGCTGATGGTACTCTTATTCTGGCAAACGGTTTGACCGCACCACGTCAAATTTTTGTTAATGGTGCTGGATTGCCAGCAAACAACAGCTTGATCCGACTTGATACAAGTTCGGATGGTAATGCTTCTGGTGACGGCGCAACGCATCTTGGCGTGAAAGCTGATGACGGAAAATTTTATCACTATTTCCGTGGTGCTGGTACGATGTTCATCGATGTGAAAGGTGGAATATCTTCTTCAACTCCGCTGTATATGAATGGTGTTGATCCGGCATTGCCCAAAATTGAAATGCTGTCAACTGGTGCGGCTGGCGGTAAAAACTTACTACGTCGATTCCGTGGTGGTCTCCCTGATATGATATGGCATGAAACTATACAGGGAACTCAATACCGACTGATGTCAGGTGCTACCGATAGTTCTATGGAATTTTTTATTGATGGTAATGGCTTAGGTCGAGGTGGTGCAATTTACGGTGGTACATTCACTGCTGATGCTGGTAATGATGGATTCAAGATCCGTTATAAACCTGCAACAGAATCAGCAATGTTCCAGATATGGAACAGAGATACGAGTGTATTGAACTCTTATTTCGGATATGGGTCAAGTAATCAGGCAACCGTTAACCTGTATAACCGATTAGGTGATATTGCTGTTTCTACACCAAACGCGGCGTTTCGGCTAGATAATACTACGTTAACTCTTGGTAACTCTGCATCAACTGCTGTTAGTCAACGTGCATTTACTATTAGAAACTGGGGTGATGGTGGATTTCGTGCTGCTGTTTTTGAAGTCAATGATGGCACTGGTTATCATTTCTATAGTCAACGCAGATCTGATAACTTGGTGGAGGTAGCATTCTCCGGTGACCTTTATACCAACGGAATATTACGCGCACAGAACAACATAATTGTTCGTGGTAGTGATGGTGTGTCTATTCAAGCGGACACAAACTGTCATGTGTGGTTTAGAAACTCTGCGGGTGCTGAAAAAGCTGTACTATACGCAGAAAATAACGGCAGCGTAAAACTACGTACATCAAACCAACAGTATTCTCTTACGATTGCTGATGGTATGATCCTGGCAACCGGACAGCCAACAACTGCGGATTCACGAGGTCTTATTCGTGGTGCAATTACTGGTGGTGCTTGGGTTGATTGGCGCAATCGTCCTGCTGGTTTGTTGGTTGATTGTCAGGATTCGTATAATCAGGCTTACAACATATGGAAAGCTACTCACTGGGGTGTTGCTCATCTTGCCGCAATGGGTGTTCATAACGGTTCTGGTGCTCCTACTGTTGGGCTACATGTTGGTGGTGCTGATTACTGGTGGGATTCTGCTGGTACTTTCAACGCTGCTGGTAATGGTAGTTTTAACGATGTGTATATTCGTTCTGATATCCGGTTGAAATCTAATCTGGTTGAACTGAAAGATGCACTGAGTAAAGTTGAACAGCTTAAAGGCTATATCTACGATAAGAAACAGAAAATCGAAGATGACGAACCACAGTATCGCGAAGCTGGTATTATTGCTCAGGATCTGCAAAAGGTTCTACCAGAAGCAGTTAGTGAACATAAAGATACTGGCATACTGACGATTTCCCCGTCAAGTGTTAACGCGCTTCTGGTCACTGCAATCAATGAATTGCGCGAACGTCTGGAAGCAATCGAACGGAAAATAGGGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a059a9c8542a2cf055ab5ee98bb5973a1c48b59f18cfa87c1cd06e5d108b9933
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5409
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomics of Morganella phages MP1 and MP2 define new clades among the T4 and T7-like viruses Pinto,G., Oliveira,A., Briers,Y., Oliveira,C., Domingues,L. and Azeredo,J. 2017-04-07 — GenBank