Protein

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Genbank accession
UPT54002.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTANNYSSPLARYAIKEMYSNPGVARQFQLQLTQVSPDVGYINTFQFMGRYIKTPIEREYFLMFNMAGFDGSTWNFKDLITRVDPVNQWVNVAKVCKDRGIVIDIYGNDGRLYPRDKCWVMSTYDGQNLLAIQKLQAFKYGWENARYLHCYTIQTDLYDPLTNPDNTDWPRFTSNNGNSVEEKDRMKIIYSQYKSLPGLTSVYLNGYLWDGFPSDDLLIGTETIEITNDPSVWKVETYAIDSLQNFYSLRDETRKLIVHPKKVEGDFTYHYVTDVSFYLVEGKGRGIYLHRNRASNFRQLTHRDYAVDATLVDDMSNLEDMLKEEQRYLRLVYRKNDYTQEMQYESSGVRYLYRMNDQNIVGALVGINSTVEEWKASNLENAETNLYLDRPYGELTHEQAVEAIGYNRATQVLCGTPVSYDPASGMELDVPPACREHLTMFEYDSEGLFLRMRDFSKLRHVLPSSDAHLVEFYPGKPGLRIHTDIGRGTMTVDRNTTPRFYYQKVTTEGNLVGERFLAVEDTHYSFDRDTGEVKWLLPSSMFIGMILYNDQTLYKEFTLDHIDNSLSFSVTEEWVQGGILTDVAPANIMVIMNRHSLIENVDYVVRFPHIYIVNHQYLKAGGNDFVLYCSEWSPIGETEPLEHTELGYVMGGVIGHNTRYNIREDRVTRTTIGGKVWDPLKVPSAEFHPPSELLNPYNGLPYGVKHWYLPIRDWVPYNLTAGWAEARDQDKRMSDYLTLFARKPEPEVIPSLMDKYRVFSPFMNAVVNQILLGLIELDDLPPGESYSEDYVLRKTAKFQWLLEHDPVTRNYDRRYFAVFPYVQQTMVAVATKELIFIRRINEVFLQNRVNINGHFEVKHV
Physico‐chemical
properties
protein length:860 AA
molecular weight: 99945,77730 Da
isoelectric point:5,41718
aromaticity:0,12791
hydropathy:-0,43616

Domains

Domains [InterPro]
IPR055617
STR
5–859
IPR055617
UPT54002.1
1 860
Architecture
STR
STR 5-859 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPT54002.1
1 860
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,8317
Central domain 161 506 347 0,2868
C-terminal 507 860 353 0,0212
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-506
C-terminal
507-860

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phiKT1019
[NCBI] 		2863680 Viruses >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPT54002.1 [NCBI]
Genbank nucleotide accession
MZ622713 [NCBI]
CDS location
range 171598 -> 174180
strand +
CDS
ATGACAGCCAATAACTACAGCAGCCCCTTAGCACGTTACGCCATTAAAGAAATGTATTCTAACCCCGGGGTTGCTCGTCAGTTTCAATTACAGCTGACACAGGTCTCCCCGGACGTTGGTTACATTAATACGTTCCAGTTCATGGGACGTTACATCAAGACACCAATCGAACGAGAATACTTTTTAATGTTTAACATGGCGGGCTTCGACGGCTCGACATGGAACTTTAAAGATTTGATCACTCGAGTGGATCCGGTGAACCAATGGGTAAACGTAGCTAAGGTCTGTAAAGATCGAGGAATCGTCATCGACATCTACGGAAACGATGGTCGTTTGTATCCTCGCGATAAATGTTGGGTTATGTCCACTTACGATGGTCAAAACCTTTTAGCCATTCAAAAACTACAAGCCTTTAAGTATGGCTGGGAAAATGCACGCTACTTGCATTGTTACACCATCCAGACGGATTTGTACGACCCACTGACAAATCCAGACAATACGGATTGGCCGCGTTTCACTTCTAATAACGGTAACAGTGTTGAAGAAAAAGATCGAATGAAGATCATCTACAGCCAGTACAAAAGCTTACCGGGATTAACGTCTGTTTACTTAAACGGATATTTGTGGGATGGATTTCCTTCGGATGATTTGTTGATTGGTACTGAAACCATCGAGATCACCAACGACCCTAGTGTCTGGAAGGTCGAGACTTACGCCATCGATTCATTGCAAAACTTTTATTCTTTGCGTGATGAAACTCGTAAGTTGATTGTCCATCCTAAAAAGGTGGAAGGTGATTTCACTTACCACTACGTGACTGATGTTTCTTTCTATTTAGTAGAAGGGAAAGGAAGAGGGATTTACCTGCATCGTAACCGTGCATCTAACTTCCGTCAATTGACTCACCGAGATTATGCCGTAGACGCCACCTTAGTGGATGACATGAGTAACTTGGAAGACATGTTGAAAGAAGAGCAACGTTATTTGCGCTTGGTGTACCGCAAGAATGATTATACTCAGGAGATGCAATACGAATCCAGTGGGGTCCGTTATTTGTACCGAATGAACGATCAAAACATCGTGGGTGCATTGGTCGGGATTAACTCTACTGTGGAAGAGTGGAAAGCATCTAACCTAGAGAACGCTGAAACTAACTTGTACTTAGATCGCCCTTACGGGGAATTGACTCATGAACAAGCAGTAGAAGCCATCGGGTATAACCGAGCGACACAAGTACTGTGCGGGACTCCGGTGAGTTACGACCCGGCAAGCGGTATGGAGTTAGACGTTCCTCCGGCGTGTCGTGAACATTTAACGATGTTTGAATACGACTCAGAAGGTTTGTTCTTAAGAATGCGTGACTTCAGTAAACTGCGTCATGTACTGCCTTCTAGCGATGCTCATTTGGTTGAGTTTTATCCGGGCAAACCGGGGTTACGTATTCATACTGACATCGGTCGTGGTACGATGACCGTTGACCGAAACACTACACCTCGTTTCTATTACCAAAAAGTAACCACCGAAGGTAATCTAGTTGGTGAACGCTTCTTGGCAGTTGAAGATACTCACTATTCTTTCGATCGTGATACTGGTGAAGTGAAATGGTTGTTACCGAGTTCTATGTTCATTGGGATGATTTTGTATAACGACCAAACGTTATATAAAGAGTTCACCTTAGACCACATTGATAACTCATTATCTTTCAGTGTTACGGAAGAGTGGGTGCAAGGTGGGATACTTACTGATGTGGCTCCGGCTAACATCATGGTGATCATGAACCGCCACTCCCTAATTGAAAACGTAGACTACGTGGTCAGATTCCCTCACATCTACATCGTCAACCACCAGTATTTAAAAGCGGGCGGTAATGACTTTGTTCTTTATTGTAGTGAGTGGAGTCCAATAGGTGAAACTGAGCCTCTAGAGCACACAGAGCTTGGTTACGTGATGGGTGGTGTGATTGGTCACAATACTCGTTACAACATCCGAGAGGACCGTGTAACTAGAACTACGATAGGTGGGAAAGTGTGGGACCCGCTGAAAGTACCATCAGCTGAATTCCATCCACCAAGTGAACTGTTAAACCCGTACAACGGTTTACCATATGGCGTTAAACACTGGTATCTTCCAATCCGAGATTGGGTACCTTACAACTTAACTGCTGGTTGGGCCGAAGCACGAGATCAGGATAAACGCATGAGTGATTACTTAACACTCTTTGCTCGTAAACCTGAACCGGAAGTAATTCCAAGCTTAATGGATAAGTACCGAGTATTTAGTCCGTTCATGAATGCCGTGGTTAACCAGATACTTTTAGGTTTAATCGAACTGGACGACCTACCTCCGGGAGAATCTTACTCCGAAGACTATGTATTGCGAAAAACAGCTAAGTTCCAATGGTTGTTAGAACACGACCCTGTGACTCGCAATTACGATAGACGGTATTTTGCAGTGTTCCCTTATGTTCAACAAACCATGGTTGCGGTTGCTACTAAGGAACTTATCTTCATCCGACGTATTAACGAAGTCTTTCTACAAAACCGAGTTAATATAAATGGACACTTTGAGGTTAAACATGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3bb44d559266eb0092ba424ce5a585b9cccaf04aa432c9359e93cb46952313f6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2943
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50