Protein

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Genbank accession
YP_009639213.1 [GenBank]
Protein name
head closure Hc3
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGKDFKNADYIDYLPINMLATPKEVLNSSGYLRSFPGIAKRNDVNGVSRGVEYNTSQNAVYRVLGSKLYKGETVVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWTADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTADELATGVMEALRLDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAIDFMYEGNQITCGDKSEAVTGQLQFDISSQYDKQQEHLLFTPIFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
Physico‐chemical
properties
protein length:461 AA
molecular weight: 51096,85030 Da
isoelectric point:5,76571
aromaticity:0,10629
hydropathy:-0,25879

Domains

Domains [InterPro]
IPR021098
STR
1–461
IPR021098
IPR021098
STR
3–461
IPR021098
YP_009639213.1
1 461
Architecture
STR
STR 1-461
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009639213.1
1 461
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,6653
Central domain 83 281 200 0,0803
C-terminal 282 461 179 0,3927
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-281
C-terminal
282-461

Taxonomy

  Name Taxonomy ID Lineage
Phage Lederbergvirus BTP1
[NCBI] 		1934252 Uroviricota > Caudoviricetes > Lederbergvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009639213.1 [NCBI]
Genbank nucleotide accession
NC_042346 [NCBI]
CDS location
range 7438 -> 8823
strand +
CDS
ATGGGTAAAGACTTCAAGAATGCCGACTACATTGATTACCTACCAATCAATATGTTGGCCACACCGAAAGAAGTACTCAACTCATCGGGTTATTTACGCTCATTCCCCGGCATAGCGAAGCGCAACGATGTAAATGGTGTATCGCGTGGTGTTGAATACAACACCTCTCAGAACGCTGTATATCGCGTTTTAGGCAGTAAGCTCTACAAAGGGGAAACCGTAGTCGGTGATGTAGCCGGAAGCGGTCGCGTATCAATGGCACATGGTCGCACATCACAGGCGGTAGGCGTTAATGGTCAACTGGTCGAGTATCGCTATGATGGCACGGTTAAAACCGTCTCAAACTGGACTGCAGACAGCGGATTCACGCAGTATGAGTTAGGCTCAGTCCGTGACATTACGCGCTTACGTGGGCGTTATGCGTGGTCAAAAGACGGCACTGATTCATGGTTTATCACTGACCTCGAAGATGAGTCGCATCCTGACCGCTACAGTGCAGAATATCGCGCAGAATCGCAGCCAGACGGTATCATTGGCATCGGAACGTGGCGAGACTTTATCGTTTGCTTTGGTTCATCGACGATAGAGTATTTCTCCCTGACAGGCGCAACCACCGTTGGCGCTGCGTTGTATGTCGCGCAGCCATCGTTAATGGTACAGAAGGGCATTGCCGGAACATACTGTAAAACGCCATTCGCTGATTCATATGCATTCATCAGTCACCCAGCTACTGGCGCACCTTCCGTCTACATCATCGGGTCAGGGCAGGCTTCACCAATTGCGACGGCCAGTATTGAGAAAATTATCCGCTCATACACGGCTGATGAACTGGCAACCGGGGTGATGGAGGCGTTGAGGCTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTGCTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACAGGTTTATACGACGATGTTTATCGCGCCATCGACTTCATGTACGAAGGCAACCAGATAACGTGCGGCGATAAATCAGAAGCAGTGACAGGGCAGTTGCAATTCGACATTAGTAGTCAGTACGACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAACGCCAGATGCTTCGATCTGGAAGTTGAATCCTCGACAGGCGTTGCGCAGTACGCTGACCGCCTGTTCCTGTCTGCAACCACAGACGGAATCAACTATGGTCGAGAGCAGATGATTGAACAAAATGAGCCGTTTGTGTACGACAAGCGTGTTATCTGGAAACGTGTTGGGCGCATTCGTCGATTAATCGGATTCAAACTGCGTGTAATCACCAAATCACCAGTAACACTATCCGGGTGTCAAATTCGTCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1b17c5c35bcddc3a95f29698df8976955e607bcb6ad45b353c8343bd71b7416
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50