Protein

View in Explore

Genbank accession

WCZ57384.1 [GenBank]

Protein name

tail fiber

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MIDYNGLKTIFGEKLPESHIFFATVAAHKYVPSYAFLRKELGLSSAHTNRKVWKKFVEAYSKAGPVDVVPGAPTLQVTPGENSVTYTITEGTNTGSPITQYKVYYTDGTTPKTHNSGSSKTGTISTLEAKEYTFQAVAVNGAGESPKSAAVKATPTAPGVGG

Physico‐chemical properties

protein length:	162 AA
molecular weight:	17151,05900 Da
isoelectric point:	9,17716
aromaticity:	0,09877
hydropathy:	-0,31914

Domains

Domains [InterPro]

IPR048804
ATT
2–60

IPR048804 IPR013783

IPR048804
ATT
2–65

IPR048804 IPR013783

IPR036116
STR
69–156

IPR036116

IPR003961
STR
69–159

IPR003961

IPR003961
STR
70–154

IPR003961

IPR003961
STR
75–153

IPR003961

WCZ57384.1

1 162

Architecture

ATT

STR

ATT 2-65 | STR 66-159 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048804	ATT	DC_0698	2	60	InterPro cluster	Decoration protein, N-terminal domain	N-terminal	High	Text match	62 proteins / 62 hits
IPR048804	ATT	DC_0698	2	65	InterPro cluster	Decoration protein, N-terminal domain	N-terminal	High	Text match	62 proteins / 62 hits
IPR013783	STR	IPR013783	63	159	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR013783	STR	IPR013783	65	159	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036116	STR	IPR036116	69	156	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR003961	STR	DC_0003	69	159	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	70	154	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	75	153	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage Kenya-K18 [NCBI]	3027606	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Salmonella enterica [NCBI]	28901	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

WCZ57384.1 [NCBI]

Genbank nucleotide accession

OQ291031.1 [NCBI]

CDS location

range 102380 -> 102868
strand -

CDS

ATGATTGATTATAATGGTCTAAAGACCATTTTTGGTGAAAAACTGCCAGAATCTCATATCTTCTTTGCTACGGTTGCTGCGCACAAATATGTTCCTAGCTACGCTTTTCTGCGTAAAGAACTAGGACTTTCATCCGCGCATACTAACCGTAAAGTATGGAAGAAATTTGTAGAGGCTTATAGTAAGGCTGGTCCAGTAGACGTTGTCCCTGGAGCCCCTACGTTGCAGGTAACTCCGGGCGAAAATTCAGTAACTTATACAATTACTGAAGGTACAAATACTGGCTCACCAATCACTCAGTATAAAGTATACTATACTGATGGAACTACTCCAAAAACCCATAATTCTGGGTCATCTAAAACAGGTACTATTTCTACCCTAGAAGCAAAAGAGTATACTTTCCAGGCAGTAGCTGTTAATGGGGCGGGAGAATCTCCTAAGTCTGCGGCAGTAAAAGCTACCCCAACGGCACCTGGTGTTGGAGGCTAA

Genome Context

Tertiary structure

PDB ID

405dd9f01315995e13287f821aca4c63df52014d6769474a23d5a54e1562eda5

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7205

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Whole genome sequence of Salmonella phage Kenya-K18	Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S.	2024-01-11	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature