Protein

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Genbank accession
AUR87658.1 [GenBank]
Protein name
intramolecular chaperone auto-processing domain protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
HIGSLVKTTAYHSGWAAKLEEPVGGAEYVIVQGNRGDDIADHNIGGTTAILIIRNGEINVDQCGARGDYFSDHDQQTVNLTPTDDTKAFQAAVKKAFHIKMSDRIYYAEDTQGLVDVTFIDNGTARSQYRITGASRMRSGVYYNGSGTFFKCESRGGSNTYFEHFRMKNIMNETDSSSSIVFNESTSVAVKLESATRVTFNDVHIQGFGNGIFAENVYGAWCEFLSIKNSELFRNLINIPLRVNGGTDSFHGLNTEDLIIHTVPNGYGFSVGEGCYIYNAKISCGFFGTGDPSEVSWIMMAGAGGNSNCEQTEFAIWSERGGKVVIEDGAKVDGEGYWHEHTGPLVIEDANTDDLKGFLVFDHGNRTWSSKQPSTKSWGRDTISSLSPGISPGANPLTGVHAVDGSGRSIVLAATESSQSGVFFAFGDAFYNLSPKSYIDNFGAFHPNESHEGRFSYVTSAPIQGSSSHGVGSIVQNQGSQRDIDARPAYSYTADTDGATPFALALQPIYASGTRPSSPITGQAMWYAPTSEPSWNNGSGWVEATVSASDATLKTDPEEISDNECLAVLEMELVKFKMLDSVAEKGDSARYHYGVIAQQCIGVLEKYGIDINTFAPILQTPVFDDDGNLVSHIWKVRYQELLVMRSEALARRISGLI
Physico‐chemical
properties
protein length:657 AA
molecular weight: 71353,12210 Da
isoelectric point:4,98503
aromaticity:0,10350
hydropathy:-0,29193

Domains

Domains [InterPro]
IPR012334
STR
54–353
IPR012334 cd10144
IPR011050
STR
55–291
IPR011050 IPR030392
DC_2290
STR
280–545
DC_2290 IPR030392
IPR036388
RBD
549–657
IPR036388
cd10144
CHP
549–652
cd10144
AUR87658.1
1 657
Architecture
STR
RBD
STR 54-548 | RBD 549-657
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR87658.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 81 81 0,8925
Central domain 82 363 283 0,9793
C-terminal 364 657 293 0,9289
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-81
Central
82-363
C-terminal
364-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.103.O._10N.261.52.F2
[NCBI] 		1881425 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87658.1 [NCBI]
Genbank nucleotide accession
MG592475 [NCBI]
CDS location
range 1 -> 1975
strand +
CDS
TCATATTGGTTCTTTAGTTAAAACCACTGCGTACCACAGTGGTTGGGCTGCCAAGCTTGAGGAACCCGTCGGTGGTGCTGAGTACGTAATTGTCCAAGGGAATAGGGGTGATGATATTGCTGATCATAATATTGGTGGCACTACTGCTATCTTGATTATTCGCAACGGTGAAATTAACGTTGACCAGTGCGGAGCAAGGGGAGACTACTTTTCCGACCACGATCAGCAAACGGTTAATTTAACACCTACCGATGATACTAAGGCATTTCAAGCAGCAGTAAAAAAAGCGTTTCATATTAAAATGTCGGATAGAATCTATTATGCTGAAGATACGCAGGGCCTTGTAGATGTGACATTCATTGATAATGGAACCGCAAGAAGTCAATACAGAATTACTGGCGCATCAAGAATGAGAAGTGGTGTTTACTATAACGGCTCTGGTACGTTCTTTAAGTGTGAATCAAGGGGTGGATCAAATACCTATTTCGAGCACTTTAGAATGAAAAACATCATGAATGAGACTGATAGCTCATCTAGTATTGTTTTTAATGAATCAACTTCTGTAGCTGTAAAGTTAGAGTCAGCCACAAGAGTTACTTTTAACGATGTTCACATACAGGGATTTGGTAATGGTATATTTGCTGAAAATGTATACGGCGCGTGGTGCGAGTTTTTATCAATTAAGAACTCAGAGTTATTTAGGAACTTAATAAACATACCGCTAAGAGTGAATGGTGGTACTGATTCTTTTCATGGTTTAAATACTGAAGATCTAATTATACATACAGTTCCTAATGGTTACGGCTTTAGCGTTGGCGAAGGTTGTTACATATATAACGCAAAGATATCTTGTGGATTCTTTGGTACTGGAGATCCTTCCGAGGTTTCTTGGATAATGATGGCTGGTGCTGGTGGCAATTCTAATTGTGAGCAAACTGAGTTTGCCATTTGGTCTGAGCGCGGTGGTAAAGTTGTTATAGAGGATGGGGCTAAGGTTGACGGTGAGGGGTACTGGCATGAGCACACTGGTCCTTTGGTTATCGAGGATGCAAATACCGACGATCTTAAGGGTTTTTTGGTTTTCGATCACGGAAATCGCACTTGGTCAAGTAAGCAGCCGTCTACAAAGTCATGGGGCAGGGATACGATATCCTCATTATCCCCTGGTATCTCACCTGGGGCAAACCCACTTACAGGTGTTCATGCTGTAGACGGTTCTGGTAGGTCTATAGTTTTAGCTGCAACAGAGTCATCCCAGTCAGGGGTATTTTTTGCTTTTGGCGATGCGTTTTACAACTTATCTCCAAAGAGTTATATAGATAACTTTGGTGCATTCCATCCGAATGAGTCACACGAGGGTAGGTTTTCTTATGTCACCAGCGCGCCTATACAGGGTAGTTCCTCTCATGGTGTCGGGTCTATAGTTCAGAATCAAGGGTCGCAGCGTGATATTGATGCTAGACCGGCGTACTCCTACACGGCAGATACCGATGGGGCTACACCTTTCGCTTTAGCTTTACAGCCGATATATGCATCTGGGACAAGACCTTCATCACCAATAACAGGTCAAGCGATGTGGTACGCCCCCACCTCTGAGCCTAGTTGGAACAATGGATCGGGGTGGGTTGAAGCAACCGTCTCCGCGTCTGATGCTACACTAAAGACCGATCCTGAAGAAATTAGTGATAACGAATGCTTGGCGGTATTGGAAATGGAGTTAGTTAAATTCAAGATGCTAGATTCAGTTGCCGAGAAAGGGGATAGCGCTAGATATCATTACGGCGTGATTGCTCAGCAATGTATTGGTGTGTTAGAAAAATACGGCATAGACATCAATACGTTTGCTCCAATATTGCAGACGCCCGTGTTTGATGATGATGGAAATCTAGTGAGCCACATATGGAAGGTGAGATATCAAGAGCTACTAGTAATGAGAAGTGAAGCCCTCGCAAGGAGAATTTCTGGGTTGATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b515f8c680c7c42cf45e18928f24a5bc94ed82e67659436275d68331a8b8586c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6743
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank