Protein

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Genbank accession
ABM63442.1 [GenBank]
Protein name
EPS-depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPETKIKPWNTEIWTDSIATLRTMDPVVSGHTVEVAGYYKGSLKGGGKFAYDPNDTTTADDGGFTIVTATGKRFKRADPIDTLDITHFGAYCNGIADDMFAVVRMRAWAATINATFNPGVRIPSGITTLSAYDFGSSELPSFKIRGPEVAYGRIPAAQIQPFDLSYTGYLIKVKARRMEVSNLMLSGVGSQCGFLENTVTRGDYCRIHGIQARNLTGRAFHVYDTIDTAVTQCYSTSGKASFFRTDWSNENPGAWDHPTAIYIADCNFETHTGEYAVSCIRAGQSVMRNCWFDRNERGFDISQGGWLLENITQENSVYPSATQYAKIVQIRNRFTQGKGMDDTVSGYDPSQDPSGQPPYWVNSGYENGTAEFALLGFINSGSMSYGYESSQFKVSNMTANQVWIDVGSFTLAGATGEGINLEFVGAGHFDAATSNPRPNGTNYGGGKTTIMMQQKDSDAKARASWFSHGASPIVAVRVAMNRNRPHVYIQLAPYTGPIAMTVHTSSKSNFEGGIHYYQNIVMTEVTADVAAAAAPLIPATWNVSNGNYGLGMQLDTGKLAVDGPALAGSNASFHFPIQYNGTDVLLAVQPSPLSTRIQRCTIATLPKATENPYGVVLVSDAVSGNGVTTWRMAFCDGSAWFTVDGGTNLGTGTVSNT
Physico‐chemical
properties
protein length:657 AA
molecular weight: 70968,46140 Da
isoelectric point:5,86871
aromaticity:0,10654
hydropathy:-0,24231

Domains

Domains [InterPro]
DC_0717
ATT
9–105
DC_0717 DC_0716
IPR011050
STR
79–325
IPR011050
ABM63442.1
1 657
Architecture
ATT
STR
ATT 9-105 | STR 106-595 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABM63442.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9826
Central domain 99 377 280 0,9748
C-terminal 378 657 279 0,9817
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-377
C-terminal
378-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Era103
[NCBI] 		418443 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Eracentumvirus
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABM63442.1 [NCBI]
Genbank nucleotide accession
EF160123 [NCBI]
CDS location
range 42715 -> 44688
strand +
CDS
ATGCCGGAAACTAAGATTAAGCCGTGGAACACAGAGATTTGGACTGATTCCATCGCTACATTACGTACTATGGACCCGGTAGTCTCTGGACATACCGTGGAAGTGGCAGGTTACTACAAGGGTTCTTTGAAGGGTGGCGGCAAGTTCGCTTATGACCCTAATGACACAACCACCGCTGATGATGGCGGGTTTACCATTGTCACTGCTACTGGCAAGAGATTTAAGCGTGCAGACCCCATCGACACCCTGGATATTACTCACTTCGGTGCGTACTGCAATGGGATTGCTGATGATATGTTTGCAGTAGTTCGTATGCGTGCATGGGCAGCTACCATTAATGCAACGTTTAACCCAGGTGTGCGTATTCCATCTGGTATTACTACGCTGAGCGCTTATGACTTTGGTAGCAGTGAGCTTCCATCGTTTAAGATTCGTGGGCCTGAAGTTGCCTATGGACGCATCCCCGCTGCACAGATTCAACCGTTCGACCTGTCTTACACTGGGTATCTTATCAAGGTGAAGGCACGCCGTATGGAAGTATCTAACCTGATGCTGAGTGGTGTTGGTAGTCAGTGTGGGTTCTTGGAGAACACTGTGACCCGTGGTGACTATTGCCGCATTCATGGTATACAGGCACGTAACCTGACTGGTCGTGCATTCCATGTGTACGATACCATCGATACCGCTGTGACCCAGTGTTACTCAACCAGTGGCAAGGCTTCGTTCTTCCGTACTGATTGGTCGAATGAAAACCCAGGTGCATGGGATCACCCAACGGCTATCTACATCGCAGACTGTAACTTTGAAACTCACACAGGTGAGTACGCAGTGTCGTGTATTCGTGCAGGTCAGTCTGTCATGCGCAACTGCTGGTTTGACCGTAACGAGCGTGGCTTCGATATCTCACAAGGCGGCTGGTTGCTGGAGAACATCACACAGGAAAACAGTGTGTACCCATCTGCAACTCAGTATGCGAAGATCGTTCAGATTCGTAACCGCTTTACTCAGGGTAAGGGTATGGATGATACCGTGTCTGGCTACGACCCATCGCAAGACCCGTCAGGCCAGCCACCATACTGGGTAAACTCAGGTTATGAGAACGGCACTGCTGAATTCGCGCTGCTGGGCTTCATCAACTCCGGCTCAATGTCTTACGGTTATGAATCATCTCAGTTCAAAGTCAGCAACATGACTGCGAATCAGGTGTGGATTGACGTAGGCTCGTTCACGTTGGCTGGGGCTACTGGTGAAGGTATTAACCTTGAGTTCGTTGGTGCAGGTCACTTTGATGCTGCTACTTCCAACCCACGTCCAAATGGAACCAACTACGGTGGTGGTAAGACGACCATCATGATGCAGCAGAAGGACTCTGATGCGAAGGCCCGTGCAAGCTGGTTCTCACATGGTGCATCGCCTATCGTGGCTGTGCGCGTAGCCATGAACCGGAACCGCCCACACGTCTACATCCAGCTGGCTCCGTACACTGGCCCAATTGCGATGACCGTGCATACCAGCTCGAAGTCTAACTTTGAGGGTGGTATTCACTACTACCAGAACATCGTGATGACCGAGGTTACAGCTGACGTAGCCGCAGCCGCTGCTCCACTGATTCCCGCAACATGGAACGTGTCGAACGGTAACTACGGTTTGGGTATGCAGCTGGACACTGGTAAGCTGGCCGTGGACGGTCCGGCGCTGGCGGGCAGCAATGCGAGTTTTCACTTCCCTATCCAGTACAACGGCACAGATGTGCTGCTGGCGGTACAGCCTAGCCCATTGTCTACCAGGATTCAGCGCTGCACCATCGCCACATTGCCTAAAGCTACAGAGAACCCTTATGGGGTAGTCCTTGTATCTGATGCGGTGTCTGGTAATGGTGTAACCACCTGGCGCATGGCATTCTGTGATGGCTCTGCATGGTTCACTGTAGATGGTGGAACTAACCTGGGTACTGGTACAGTATCTAACACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
748aa19b70e590e91a98f013425c828f71c964c83f0cfffc735265c85c9614fc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Erwinia amylovora phage Era103, a new member of the T7 superfamily related to SP6, K1-5 and K1E Summer,E.J., Thilaganathan,N., Hall,J., Vidaver,A.K., King,M.D., Robinson,S., Young,R. and Gonzalez,C.F. 2010-01 — GenBank