Protein

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Genbank accession
YP_009225458.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAISPKNLYPSRVIDGDGAYPYGKALNVQNGVEGTGTPLEAEWLNDIWGSQQALLADVGIAPNGQPDSVGNSQYLDALKKLIREPLELKIFQSPSSGGLTEIQTRTVNGGKVYEVRKTSDDSLATIYSDAAGTAEIVQNGTSNVSGSDGVVEFFIAEGDYYVEVGGVSAGFVVGSIADGLAETQRVMRKLKNGEDANIVVFSDSTGDATDEWVYKLAEKLAGDFSNLTVFYRLWDSGAGNYAARVTVQSAGSQVLTIWNAAIAGSNANRFCGSEFNAAARPSQVGGSPDLYFVNYGHNGGNQLERQYSMHSQLISLLVEFSSDSPVIIIGQNPVLSDDSMQRKVEVFQKIARVYGCGYIDINSYFLENLNPLADYYKDDVHPNETGSEVWAQLVHDKFRYNKDLASATTQSGNKSQAYSVLDTFNQMLRVSSSTANVTLERYGVNFETSGQSLKMTGNGVASPTPFAYFDVIDSKDIRSFIGKTICINVRLKTDVGAGALTGRIAAYDGIQTITSTNGGESGGRYIDQSMIITVDSAATYLRVYVYIDASTPSDSVYIDRIVTSFDRDIAEGTSLSRIDAAEFISIFGAGGVNGNLVVGNSTSNGRAISVLDLISGDIDDDPNTQYVASVSANGVEVKQRGDTFPRVHINTSGLIQLSKGASGFTTYIDSPLDNNIRIGTANVYPSVDATYDIGIGGYTWRRLQLSDGVFVGGTKVTGSQQVAISDSVGGDESAKINSILAALRAHGLIAT
Physico‐chemical
properties
protein length:751 AA
molecular weight: 80204,93720 Da
isoelectric point:4,65167
aromaticity:0,08788
hydropathy:-0,15499

Domains

Domains [InterPro]
DC_0226
STR
1–356
DC_0226 DC_2072
IPR036514
STR
180–398
IPR036514
SSF52266
STR
201–398
SSF52266
IPR013830
ENZ
239–388
IPR013830
cd00229
ENZ
259–397
cd00229
YP_009225458.1
1 751
Architecture
STR
STR 1-751
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009225458.1
1 751
Domain Start End Length (AA) Confidence
N-terminal 1 180 180 0,9934
Central domain 181 379 200 0,6619
C-terminal 380 751 371 0,6750
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-180
Central
181-379
C-terminal
380-751

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage H101
[NCBI] 		1654919 Uroviricota > Caudoviricetes > Shandongvirus >
Host Pseudoalteromonas marina
[NCBI] 		267375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009225458.1 [NCBI]
Genbank nucleotide accession
NC_029094.1 [NCBI]
CDS location
range 17154 -> 19409
strand +
CDS
ATGGCGATTTCACCAAAGAACCTCTACCCATCAAGAGTAATAGATGGCGATGGTGCTTACCCTTATGGGAAGGCTCTAAATGTGCAGAATGGTGTTGAGGGGACAGGAACTCCTCTTGAAGCAGAGTGGTTAAATGATATATGGGGTAGTCAGCAAGCGTTGTTGGCTGATGTAGGTATAGCTCCTAATGGACAGCCAGATAGTGTGGGTAACAGTCAGTATTTAGACGCATTGAAGAAACTTATCAGAGAGCCACTTGAATTGAAGATTTTCCAAAGTCCTTCTTCGGGAGGCCTCACTGAAATACAAACACGCACTGTTAACGGTGGAAAAGTGTACGAAGTGCGTAAAACTTCTGATGATTCATTAGCTACCATTTACAGTGATGCCGCTGGTACGGCTGAGATCGTGCAGAATGGTACGAGTAACGTATCGGGTAGTGATGGTGTTGTTGAGTTTTTTATTGCTGAGGGGGATTATTATGTTGAGGTTGGTGGGGTTAGTGCTGGGTTTGTCGTTGGGTCTATTGCCGACGGCCTCGCTGAAACCCAGCGCGTAATGCGGAAGCTTAAAAATGGTGAGGATGCTAACATTGTCGTGTTCAGCGACTCCACAGGAGATGCCACTGATGAATGGGTGTACAAGCTGGCTGAGAAACTTGCAGGTGATTTTTCAAACCTGACTGTTTTCTATAGATTGTGGGATTCTGGCGCAGGTAACTACGCGGCACGAGTAACAGTGCAGTCCGCTGGTAGTCAGGTGCTAACGATATGGAATGCAGCTATTGCAGGTAGTAACGCTAATAGATTTTGTGGCAGCGAATTTAATGCGGCGGCACGACCATCTCAGGTAGGTGGTTCACCTGACCTGTATTTTGTAAACTATGGGCACAATGGTGGTAATCAGCTAGAAAGACAGTATTCGATGCACTCGCAGTTGATTAGCCTGCTAGTTGAGTTTAGCTCAGACTCCCCAGTGATTATAATCGGACAAAACCCTGTCCTAAGTGACGACTCAATGCAACGTAAGGTAGAGGTTTTCCAAAAGATTGCGAGAGTTTACGGGTGCGGATACATAGATATAAACAGCTATTTCCTAGAGAATTTAAACCCACTTGCAGACTACTACAAAGATGATGTTCACCCGAATGAGACTGGGTCTGAAGTTTGGGCGCAATTAGTCCACGACAAATTTAGATATAACAAAGATTTGGCTTCTGCAACAACTCAAAGCGGGAATAAATCGCAGGCTTATAGCGTTTTAGATACGTTTAATCAGATGTTGCGTGTATCATCAAGCACAGCTAATGTCACACTAGAGCGGTATGGTGTTAATTTTGAGACATCTGGTCAATCTCTAAAGATGACTGGTAACGGAGTGGCATCACCGACGCCTTTCGCGTATTTTGACGTGATTGATTCTAAGGACATTAGATCGTTTATCGGTAAAACAATATGTATCAACGTGAGACTGAAAACAGATGTAGGTGCTGGGGCACTAACGGGGCGTATAGCAGCATACGATGGTATACAGACTATAACAAGCACTAACGGTGGGGAAAGCGGTGGTAGATATATAGATCAATCTATGATTATAACTGTAGATAGTGCTGCTACGTACTTGAGAGTGTATGTTTATATTGACGCATCAACACCGTCAGACTCTGTTTACATAGACCGCATAGTCACAAGTTTTGATAGAGACATAGCGGAGGGCACTAGTCTTAGCAGAATTGATGCTGCTGAGTTTATAAGCATATTTGGTGCTGGCGGTGTAAACGGTAATTTGGTTGTTGGTAACAGCACTAGTAACGGCAGGGCTATTAGTGTTTTAGATTTGATATCGGGAGATATAGATGATGACCCAAACACGCAGTATGTAGCCAGTGTGAGCGCAAACGGGGTTGAGGTTAAACAACGTGGTGACACATTCCCGCGAGTTCACATAAACACCAGTGGGCTTATACAACTGTCAAAAGGCGCGTCAGGATTTACAACGTATATAGACTCCCCCTTGGATAACAATATTCGCATCGGCACTGCTAATGTATACCCGTCAGTGGATGCTACATACGACATAGGCATTGGCGGTTACACATGGCGTAGATTGCAACTCAGTGACGGCGTTTTTGTTGGCGGAACTAAAGTTACAGGTAGTCAGCAAGTTGCCATATCTGATAGCGTTGGAGGTGACGAGTCTGCTAAAATCAACAGCATTCTAGCAGCACTACGAGCACACGGGCTGATAGCCACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5a83baf7ed30cd2735f6c2aeff1688647759be1c1f8b191e136f7fd0ddefb57
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7035
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50