Protein

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Genbank accession
YP_010112634.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,76
Protein sequence
MALYATKDELNELTGLVRTLLGNIKTLDTSVGELDTLVERINHLSTLKDVTITYITEGDLLLYASDGTWHNIQPSALGIGGGEGGGVVDTSVVKALIKSEGSKLFISKLYDDVSSGIITFNGGLRSNKMTYLNQGVLMGTFVTGMIGGTGAQIDKDGRGEMTSLILREFLEVPELRFNKIDVVSGELWNSIAFGTIEDVDLVNQIVTLKLEEGEYSGIHVNDICRGIFHNFDGVNNTETGTDDCGFDKVQGFSTAYFTPIEVLDARGKQFRYSLKQGTTQHPCKAMKFAVYGNFTDETRRSSAYATRTYKRYLKGVNTWALNYTNIASQFGNLNGLTIPGAPNNGQLQGDGAYLTNVYMTGSIIEFTPELLDQLHGQDAYAVSLSSEFGTVIVDNEFNIIEDYNQTKSLTFAVLAWKGKTELTYSTVYNEGSYFVEYTPTGVECTMQDGVFKVTKITNINDMRIDLVINCEGAISVNRRYNMSYQLEANGLWVTYNDNDATPDRPVGDGTSYGWHRNYTASAIWMSTKSSRKVDEGEWGDPNRFRGASVKGADGQYTVFCYTNSSVQPPKPTSTLIPPVDDNYTWYMYPPKRESKEVFTWMIQATVYPDKSLSSWTDPIRLTGETGEDGSDGTKLEFIYQVTSVNKAPDKPDTSLQDDYIPFGWSDSPQGVSKEKMYEWVSQREKKSAKIGEGVWGEFTQPVLWSKWGEKGMDGDGYEYIFTRTADVDRVPQTPSSIQLNDYIPTISNGGSKDYNWSDDPKGVNEDYKAEWTCKRVRTDGVWSNFSTPALWSNWGEQGLSGGHYQYRWKVSATKPAIPTDTAASGWTTDSEIVPPEGQYVWLIQRFANPDGTLTAWSNLIRLTGADGEDGKDGNSIEFIYTRNADGKTPSTPASVNQAGHIPSGWSNHPQGVTASLVYEWVSQRYLDKATQVWGNWSTPGIWSRYAERGKDGDGYEYIYKRFSNYVGGDSLGPGGSNYPPANVDSSEYQADDYVPSGWSDNPVGPTESIPYEYVWTRKKENSKWHAWKTGALWAKWSKDGEPGRPGQDGKPGEPGEPGKPGSNGYSITVNGCPSAIRSSEGFLQTTNVKLSAIKVRVDDSATSSVSGYWKSYYLNSSGSWQLINSTSGTTFTSTWNSSLSTTKFWFGFTTDSGDYSSLSPTSQYKVWSAEVPVVFDGDVSDIDETYTIMRDRGQWRSGVQYYHDKASNAIKGQDVSSVTNYYLYSTDQSVSYDTTNWSTNVPTNTYAQGKLHSYSKITYSDGTITKTIPEVLLTYSNSRVTSVTQYFANSTNTSVPSEGWSTNKPALNKDKPYLFRYFTVNYVNSNSQSTSTNSTKKAIAKYLNDYTQYLNYDNLTIIDYVVYQGNVYLAKQNNTSLTPSMTSSYWNISSKQEILTVNNLLANNAKLGDFNFSGSVFTSNNGKLSMNSNTGRFVCTDVNITGSITATSGTFNGTVNASGGNFSSVKINSGQIAGFEISGNHIGSSATAGGSGGGLSINPDFIRVGNSTSYVMIGRDTVPATVGGAFTATGRFVNHNYNASIQYGFDSANYGLYVDVANGTKNYALYSPNAAVRAAAVYGDTLNVVSITGSTYKLDMSKGNIIMIKANREYNVNLPNAHDVASMFGYKSLPTYFAIYVRIMIHPDTSGVTISGYFRSNNTVNQSVYLYPGNSMGFLVTNYPSFRWVETDYAGQ
Physico‐chemical
properties
protein length:1692 AA
molecular weight: 186486,69650 Da
isoelectric point:5,15089
aromaticity:0,12175
hydropathy:-0,48091

Domains

Domains [InterPro]
DC_0204
STR
3–1191
DC_0204
YP_010112634.1
1 1692
Architecture
STR
STR 3-1191 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010112634.1
1 1692
Domain Start End Length (AA) Confidence
N-terminal 1 221 221 0,9837
Central domain 222 1606 1386 0,1895
C-terminal 1607 1692 85 0,8404
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-221
Central
222-1606
C-terminal
1607-1692

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr6_1
[NCBI] 		2772085 Uroviricota > Caudoviricetes > Crassvirales > Bearivirinae > Afonbuvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010112634.1 [NCBI]
Genbank nucleotide accession
NC_055894 [NCBI]
CDS location
range 4820 -> 9898
strand -
CDS
ATGGCATAGTATGCAACTAAAGATGAATTAAACGAACTCACTGGACTAGTAAGAACATTATAGGGCAATATAAAAACTCTAGATACTAGTGTTGGTGAGCTTGATACATTAGTAGAAAGAATTAATCACCTATCTACTCTAAAAGATGTTACTATTACTTATATTACAGAAGGAGATTTACTGTAGTATGCTAGTGATGGTACATGGCACAATATCCAACCATCAGCATTAGGTATTGGCGGTGGTGAAGGTGGAGGTGTAGTAGATACTTCTGTAGTAAAAGCTTTGATTAAATCTGAAGGTAGTAAGCTATTTATAAGTAAACTATATGATGATGTATCTTCAGGTATAATTACTTTCAACGGTGGTTTAAGAAGTAATAAAATGACTTATCTAAATCAAGGAGTTTAGATGGGTACTTTTGTTACTGGTATGATTGGTGGTACTGGTGCTCAGATAGATAAAGATGGTAGAGGTGAAATGACCAGTCTTATTCTTAGAGAGTTCTTAGAAGTACCAGAATTGAGATTTAATAAGATAGATGTAGTAAGTGGTGAACTATGGAATTCAATAGCATTTGGTACTATTGAAGATGTAGACTTAGTTAACCAAATAGTTACATTGAAACTAGAAGAAGGTGAATATAGTGGTATACATGTAAATGATATATGTAGAGGTATATTCCATAATTTTGATGGAGTTAATAATACTGAAACTGGTACTGACGATTGTGGGTTTGATAAAGTACAAGGATTCTCTACAGCTTACTTTACTCCTATAGAAGTACTAGATGCTAGAGGTAAACAATTTAGATATTCATTAAAACAAGGTACTACACAGCATCCTTGTAAGGCAATGAAGTTTGCTGTTTATGGTAACTTTACTGATGAAACTAGAAGATCTAGCGCTTATGCTACTCGTACATATAAACGATATTTAAAAGGTGTAAATACTTGGGCTCTTAACTATACTAACATAGCTTCACAGTTTGGTAACTTAAACGGTCTTACTATACCAGGAGCTCCTAATAATGGTCAATTACAAGGTGATGGTGCATACTTGACTAATGTATATATGACTGGTTCTATTATTGAATTTACACCAGAATAGTTAGATCAATTACATGGACAAGATGCTTATGCTGTTTCACTTAGTAGTGAGTTTGGTACAGTAATTGTAGATAATGAATTTAATATCATTGAAGATTATAACCAAACCAAATCTCTTACTTTTGCTGTATAGGCTTGGAAAGGTAAAACAGAACTAACATATAGTACAGTATATAATGAAGGTAGTTACTTTGTAGAGTATACTCCAACAGGTGTAGAATGTACTATGCAAGATGGTGTATTCAAAGTAACTAAGATAACTAATATCAATGATATGCGAATTGATTTAGTTATTAACTGTGAAGGAGCTATATCAGTAAATAGAAGATACAATATGAGTTACCAACTTGAAGCTAACGGATTGTGGGTAACTTATAATGATAATGATGCTACACCAGATAGACCTGTTGGTGATGGTACTTCTTATGGATGGCATAGAAACTATACAGCTTCAGCAATTTGGATGTCTACTAAGAGTTCTCGTAAAGTAGATGAAGGAGAGTGGGGAGATCCGAATAGATTCCGTGGTGCTTCAGTAAAAGGTGCTGATGGTCAATACACAGTGTTCTGTTATACTAATTCTAGTGTACAACCACCTAAACCTACTAGTACATAGATACCTCCTGTAGACGATAACTATACTTGGTACATGTATCCGCCTAAGAGAGAAAGTAAAGAAGTATTCACTTGGATGATTCAAGCTACTGTATATCCAGATAAATCATTATCAAGTTGGACAGATCCTATTAGACTTACTGGGGAAACAGGTGAAGACGGTTCTGATGGTACTAAACTTGAATTTATTTATCAAGTAACTAGTGTTAACAAAGCTCCTGATAAACCGGATACATCTTAGCAAGACGATTACATACCATTTGGTTGGTCAGATAGTCCTCAAGGAGTATCTAAAGAGAAAATGTACGAATGGGTATCACAACGTGAAAAGAAGTCTGCTAAAATTGGAGAAGGTGTATGGGGAGAATTTACACAACCAGTTTTGTGGTCTAAGTGGGGTGAAAAAGGTATGGATGGCGATGGGTATGAATATATATTTACTCGTACTGCTGACGTTGATAGAGTACCACAAACTCCTTCATCTATTCAATAGAATGACTATATTCCTACTATATCTAACGGTGGTTCTAAAGACTATAACTGGTCTGATGATCCAAAGGGAGTAAATGAAGACTATAAAGCAGAATGGACTTGTAAACGTGTACGTACAGATGGAGTATGGTCTAACTTTAGTACACCAGCACTATGGTCTAATTGGGGTGAACAAGGTTTATCAGGTGGTCATTATCAATATAGATGGAAAGTGTCTGCTACTAAACCTGCTATTCCAACAGATACAGCTGCTTCAGGTTGGACTACTGATAGTGAGATAGTTCCACCAGAAGGACAATATGTTTGGTAGATTCAACGATTTGCTAATCCAGATGGTACTTTAACAGCATGGTCTAACCTTATACGTCTTACTGGTGCTGACGGTGAAGATGGTAAAGATGGTAACAGCATTGAATTTATTTATACTAGAAATGCTGATGGTAAAACTCCTAGTACTCCTGCTAGTGTAAATCAAGCTGGTCATATACCTAGTGGTTGGTCTAATCATCCTCAGGGTGTAACTGCATCTTTAGTATATGAATGGGTATCTCAGAGATACTTAGATAAGGCTACACAAGTATGGGGTAACTGGTCTACTCCTGGTATATGGTCTAGATATGCTGAAAGAGGTAAAGATGGTGATGGTTACGAATACATCTATAAGAGATTCTCTAACTATGTTGGTGGAGATAGTTTAGGTCCTGGTGGTTCTAATTACCCACCTGCAAACGTAGATTCTAGTGAATATCAAGCTGATGATTATGTACCTAGTGGATGGAGTGATAATCCAGTTGGACCTACTGAATCTATACCTTACGAATATGTTTGGACTAGAAAGAAAGAGAATAGTAAATGGCACGCTTGGAAAACTGGAGCACTATGGGCTAAATGGTCTAAGGATGGTGAGCCAGGCAGACCAGGTCAAGATGGTAAACCAGGTGAACCTGGAGAACCAGGTAAGCCAGGATCTAATGGTTATAGTATAACTGTTAATGGTTGTCCTTCTGCTATTAGATCTTCAGAGGGATTCTTACAGACTACAAATGTAAAGCTAAGTGCTATAAAAGTTAGGGTTGATGATAGTGCTACTAGTTCTGTATCAGGATATTGGAAAAGCTATTATTTAAACAGTTCTGGTTCATGGCAATAGATCAACAGTACATCTGGAACTACGTTTACTTCCACATGGAATTCATCATTATCTACTACAAAGTTCTGGTTTGGGTTTACTACAGATAGTGGAGATTACAGTTCGTTAAGTCCTACTAGTCAATATAAAGTATGGTCAGCTGAAGTTCCAGTAGTATTTGATGGAGATGTATCTGATATAGATGAAACTTATACTATCATGAGAGATAGAGGTCAATGGAGATCTGGAGTACAATACTATCATGATAAAGCATCAAATGCAATAAAAGGTCAAGATGTATCTAGTGTAACTAATTATTACTTATATTCAACAGATCAAAGTGTATCTTATGATACTACTAACTGGTCTACTAATGTACCTACAAACACATACGCTCAAGGTAAATTACACTCTTATAGTAAGATAACATATTCAGATGGTACTATTACCAAAACAATACCTGAAGTATTATTAACATATTCTAATTCTAGAGTAACATCTGTTACACAATACTTCGCAAATTCAACTAATACATCTGTTCCTAGTGAAGGTTGGTCTACTAATAAGCCTGCATTAAACAAAGATAAACCTTATTTGTTTAGATACTTTACTGTTAATTATGTTAATAGTAACTCTCAATCTACTAGTACTAATTCTACTAAGAAGGCAATAGCTAAGTATTAGAATGATTATACTCAGTATTAGAACTATGATAATTTAACTATTATAGACTATGTAGTATATCAAGGTAATGTGTACTTAGCTAAACAGAATAATACTAGTTAGACACCCAGTATGACTAGCAGTTATTGGAATATATCTTCTAAGCAAGAAATACTAACAGTAAATAACTTACTAGCTAATAATGCTAAGTTAGGTGACTTTAACTTTAGTGGAAGTGTATTTACTTCTAATAATGGTAAACTGTCAATGAATAGTAATACTGGTAGGTTTGTTTGTACAGACGTTAATATTACTGGTAGCATAACAGCTACCTCTGGTACATTTAATGGTACTGTAAATGCATCTGGTGGTAATTTTAGTTCTGTAAAAATAAATAGTGGTCAGATAGCTGGATTTGAGATAAGTGGAAATCATATTGGTAGTAGTGCAACAGCTGGAGGTTCTGGTGGTGGTCTTAGTATAAATCCAGATTTTATTAGAGTTGGTAATAGCACATCATATGTTATGATAGGTAGAGATACTGTTCCTGCTACAGTTGGTGGAGCTTTTACAGCTACAGGTAGATTTGTAAATCATAACTATAACGCATCTATACAATACGGCTTTGACTCAGCTAATTACGGTCTATACGTAGATGTAGCAAACGGTACTAAAAATTATGCATTGTATTCACCAAATGCGGCAGTAAGAGCAGCTGCTGTATACGGAGATACTTTAAATGTAGTAAGTATTACCGGTAGTACTTATAAATTAGATATGAGTAAAGGTAATATAATAATGATTAAAGCTAATAGAGAATACAACGTCAATCTCCCGAACGCTCATGACGTAGCTAGTATGTTTGGATACAAGAGCTTACCTACATATTTTGCAATATATGTTAGAATTATGATTCACCCAGATACTTCTGGTGTTACTATATCTGGTTACTTTAGATCAAATAATACTGTAAATCAATCTGTATATTTATATCCAGGTAACTCTATGGGATTCTTAGTTACTAATTATCCAAGTTTTAGATGGGTAGAAACAGATTATGCAGGACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e08f55793f0706a83abd2f90696c647e7dd1ac2955b831001587e902c57bd49a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7111
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank