Protein

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Genbank accession
QBQ72527.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSRARDLADFISTGSIGTGILADGAVDSTEITGVTVSATEINHLGGVTSAVQTQLDTKIETLSDLGVTATSAELNYVDGVTSNIQSQLDNISVTSGSLTKSFTSGESATITLAQSITPAPVVSVTKEVAQTGQSSKGAWDVNATASNYDLHNTAYATTLTPSTLLDVTAATYDSNSRSTGGSYGPRLSSDGLKLFVNDQGANNIRQYNLSTAWLLPSSATHTTFSTASQVNDETGFCFSDNGLHFYLCDQNGSGSNMLHQYSITSGYPYDLVGYGSFTRTVNMTSLGEAAPATRMMTSVLVEDSGTKMYIFSGSGSSALIRQYTLSTAYDISSATYANKSFDVYADYGSGGYLGNSSLSSDGKQLLLANGADDIVMHYTLGTAWDISTASRVGIYNPAEDANVSGVHLKPDNSKFFMLGGSNQTFYRYSLGSSGVVALGTGSFASTDVGKRIQGNGGDVILTSTAGAYDTTGGSDFTDSSTIASGSWTMHGLKSAGDADGLTLAGKANSYDIANSSNIQTYGGINNYADFPSGLYVRPDGSAFYYVDRDSTRRRVYEFPMSTPYDLSTATYADNYYVGGEDTSPMDVKFKPDGTKMYVLGDQLDRIFQYDLSTPWNFSSASYNFIFKGVNHASSTGFYLKPDGTTVYTIGTDGNCYQHTMSTAWDISTAGSYVATKDIGAVHGLSDYAMVLSDDGTKAFFSRQNDGTVYQWNLSTAWDISTASYSSISFSYSSDIASLAGLYFGNGGEYIYLIDYSTQDMNRYTVGSFSIPTSQYNLAVTNASGQIDSQFWQDINSMTADQSLGDGEAYYAVSTDDRTTWSVAKASDGVRPIVRDNAGTWQYNTAVTTVGGSVASASYDSVSAQFTINQNAYEIHWRDSGNLLFVQDSGGNQVVKYTASTPYDVTTLTQSQTYSFSGQEIYETSFYISPDGLHFYIAGSQNPGVHEYSLSTAYDLTTVSYDGKFLLAGSTAGTISFKPDGTRIYVGYYNTNAINTWPLTTAWDTSSYGTMQSLTPTEITRSTAIQFNADGTKMFVMDTSVDKIFRFNLSTAYDITTATKDEEFLYSAQTTQAQGFAFNNDFTKMNISGSISGSYSTIYQYSSTQSSYTTSATWTNATTNDEFYALQQALGATEFNRMDKTQLDAVADGSHFTLGNTLDLMIALKQDTASASLPTSDGVTINYDAAALNQGAVLGTDYDYDFPANNKVRITSNAAQNLKIRVV
Physico‐chemical
properties
protein length:1222 AA
molecular weight: 131068,35090 Da
isoelectric point:4,39868
aromaticity:0,11702
hydropathy:-0,27185

Domains

Domains [InterPro]
SSF75011
STR
167–432
SSF75011 IPR015943 SSF63825 DC_1851
SSF75011
STR
506–758
SSF75011 IPR015943
QBQ72527.1
1 1222
Architecture
STR
STR
STR
RBD
STR 167-432 | STR 494-758 | STR 865-1179 | RBD 1180-1222
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72527.1
1 1222
Domain Start End Length (AA) Confidence
N-terminal 1 111 111 0,8084
Central domain 112 348 238 0,7330
C-terminal 349 1222 873 0,1535
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-111
Central
112-348
C-terminal
349-1222

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-2
[NCBI] 		2559281 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72527.1 [NCBI]
Genbank nucleotide accession
MK613344 [NCBI]
CDS location
range 30440 -> 34108
strand -
CDS
ATGAGTAGAGCAAGAGACTTAGCCGATTTTATAAGCACTGGCAGTATAGGGACTGGTATTCTTGCTGACGGTGCAGTTGATAGTACTGAGATAACAGGAGTAACTGTATCTGCAACTGAGATAAACCATTTAGGTGGTGTAACCTCTGCCGTACAAACACAGCTAGATACTAAAATAGAAACACTAAGTGATTTAGGTGTTACAGCTACTTCTGCCGAACTAAACTATGTAGACGGTGTTACATCAAATATTCAGTCGCAGCTAGACAACATCAGTGTTACATCAGGTAGTCTAACTAAGTCGTTTACTTCAGGTGAGTCTGCTACTATTACTCTTGCTCAGTCTATCACTCCTGCACCTGTTGTGTCTGTCACTAAAGAAGTAGCACAAACTGGTCAGTCATCTAAGGGTGCTTGGGATGTAAATGCTACAGCGTCTAACTATGATCTGCATAACACTGCGTATGCGACTACGTTAACGCCTAGTACTTTATTAGATGTTACGGCTGCAACATATGATAGTAACTCAAGAAGTACTGGCGGCTCATATGGCCCTAGACTTTCTTCCGATGGTTTAAAGTTATTTGTAAATGACCAAGGTGCAAATAATATTAGGCAATACAATTTAAGCACTGCTTGGCTTCTGCCTTCATCAGCAACACACACTACGTTTAGCACTGCCTCACAAGTGAATGATGAAACTGGGTTTTGTTTTTCAGACAACGGTTTGCATTTTTATCTTTGTGATCAAAACGGATCAGGCAGTAATATGTTGCATCAGTATAGCATAACAAGCGGCTATCCATATGATTTGGTTGGTTATGGTAGTTTTACAAGAACGGTAAACATGACAAGCTTGGGCGAAGCCGCCCCTGCTACAAGAATGATGACTTCTGTTTTAGTAGAAGATAGTGGCACTAAAATGTATATTTTTAGTGGTTCAGGTTCGTCTGCTTTAATAAGACAATACACTTTAAGCACTGCCTACGATATTAGTTCTGCTACTTACGCAAATAAATCTTTTGATGTTTACGCTGATTATGGATCAGGTGGTTATCTTGGCAATTCCTCACTTTCATCAGATGGCAAACAACTTTTACTAGCTAATGGTGCAGATGATATTGTTATGCACTACACATTAGGAACTGCTTGGGATATTAGTACTGCTTCTAGAGTTGGAATATATAACCCTGCGGAAGATGCCAACGTATCAGGCGTACATTTAAAACCTGATAACTCAAAATTCTTCATGCTAGGCGGGTCTAATCAAACTTTTTATAGATATAGTTTAGGCTCAAGTGGTGTAGTAGCCCTAGGCACAGGCTCCTTTGCATCTACAGACGTAGGCAAACGCATTCAAGGTAATGGCGGTGATGTAATCCTTACAAGCACTGCGGGTGCGTATGACACTACAGGTGGATCAGACTTTACTGATAGCAGCACTATTGCGTCAGGCTCTTGGACTATGCATGGGCTAAAGTCTGCGGGTGATGCTGATGGGCTTACTCTTGCGGGTAAAGCAAACTCGTATGATATTGCTAATTCGTCTAACATACAAACATATGGTGGTATAAATAACTATGCAGACTTTCCAAGTGGTTTGTATGTAAGGCCAGATGGTTCAGCATTTTACTATGTAGATAGGGATAGTACTCGTAGACGAGTGTATGAGTTCCCTATGAGTACTCCTTACGATTTATCTACAGCAACTTATGCTGATAATTACTATGTCGGGGGTGAAGACACTTCTCCTATGGACGTAAAATTTAAACCTGATGGTACAAAAATGTATGTATTAGGGGATCAGTTAGATAGAATATTTCAATATGATTTAAGTACACCTTGGAATTTTTCTTCTGCTTCCTATAATTTTATATTTAAAGGTGTAAATCATGCATCAAGCACAGGTTTTTATTTAAAGCCTGATGGAACGACTGTTTATACAATAGGAACGGATGGAAATTGTTATCAACATACTATGTCTACAGCTTGGGATATTAGTACTGCTGGCTCTTATGTTGCAACTAAAGACATAGGTGCAGTACATGGTCTTAGTGATTACGCTATGGTTCTTTCTGATGATGGAACTAAGGCATTCTTTAGTAGACAGAATGATGGTACAGTGTATCAGTGGAATTTAAGTACAGCTTGGGACATATCTACAGCAAGCTATTCTAGTATTTCTTTTAGTTACTCAAGTGATATAGCAAGCTTAGCTGGATTGTACTTTGGTAATGGTGGTGAATACATATATCTTATAGATTATTCAACCCAAGATATGAACCGTTACACTGTAGGTTCATTTAGTATCCCCACATCCCAATACAACCTAGCCGTAACAAACGCATCTGGACAAATAGACAGCCAGTTCTGGCAAGACATCAACAGCATGACAGCCGATCAGTCACTAGGTGATGGTGAGGCATACTATGCAGTCTCTACAGATGATCGCACTACATGGTCTGTCGCAAAGGCAAGCGATGGTGTTCGTCCTATTGTGAGAGATAATGCGGGTACTTGGCAGTATAATACGGCTGTTACTACAGTAGGGGGTAGTGTTGCCTCCGCAAGCTACGACAGTGTGTCTGCTCAGTTTACAATAAACCAGAACGCATATGAAATTCACTGGAGAGACAGTGGAAACTTATTGTTTGTACAAGATAGTGGTGGCAATCAAGTAGTTAAGTATACAGCATCAACACCGTATGATGTAACTACTTTAACGCAGTCTCAAACATACAGCTTCTCTGGTCAGGAAATATATGAAACATCTTTCTATATCAGCCCAGATGGATTGCATTTTTACATTGCGGGTAGTCAAAACCCAGGAGTACACGAATACAGTCTTTCAACAGCATATGATTTAACTACTGTATCATATGATGGAAAGTTTCTTCTTGCGGGAAGCACTGCAGGTACAATTTCATTTAAGCCAGATGGAACGAGGATATATGTTGGTTATTACAACACTAATGCAATCAACACATGGCCCTTAACTACAGCTTGGGATACGTCTAGTTATGGTACTATGCAGAGTCTTACACCTACTGAAATTACAAGGTCTACGGCAATACAATTTAATGCTGATGGAACTAAGATGTTTGTTATGGATACATCAGTAGATAAGATATTTAGATTTAACCTAAGTACAGCATACGACATAACTACAGCAACAAAAGATGAAGAGTTTTTATATTCTGCTCAAACAACACAGGCGCAAGGTTTTGCATTCAATAATGACTTCACTAAAATGAACATTAGTGGATCAATTAGCGGCTCTTACTCTACTATATACCAGTATAGCAGCACTCAAAGCTCTTACACCACCTCAGCCACATGGACTAACGCCACAACTAACGATGAGTTCTACGCACTACAGCAAGCACTAGGTGCAACTGAGTTCAACCGCATGGATAAGACGCAGCTAGACGCAGTAGCAGATGGTTCTCACTTTACGCTAGGCAATACGTTAGACCTGATGATTGCACTAAAGCAAGACACTGCATCAGCCTCACTGCCTACCTCAGACGGTGTAACAATTAACTACGATGCTGCTGCACTTAACCAAGGTGCGGTGCTAGGGACTGACTATGACTACGACTTCCCAGCAAACAACAAGGTTCGCATTACTTCTAATGCTGCACAGAACCTGAAGATACGTGTAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5dd43de96c5af298b533b09a9590119e923c2c9fabd78092a66986853d5668a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6488
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank