Protein

View in Explore
Genbank accession
YP_009196421.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKIDLNSLTKNELTLYKRALQAILRTGEVQIVFEKVDGSVTVRRGTLQSRLITEKAPDVLTTETKGQEKRAENMESVRFFDLDINEFRTFRMDDLVSLGGNKPEDLIKF
Physico‐chemical
properties
protein length:109 AA
molecular weight: 12522,22800 Da
isoelectric point:6,32353
aromaticity:0,06422
hydropathy:-0,44312

Domains

Domains [InterPro]
IPR024401
STR
19–96
IPR024401
YP_009196421.1
1 109
Architecture
STR
STR 19-96 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage S13
[NCBI] 		1327935 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009196421.1 [NCBI]
Genbank nucleotide accession
NC_028773.1 [NCBI]
CDS location
range 29979 -> 30308
strand +
CDS
ATGAAAATCGATCTGAATTCACTGACTAAAAATGAACTAACTCTTTACAAACGTGCATTACAGGCAATTCTACGCACTGGTGAAGTCCAAATTGTATTCGAGAAAGTTGATGGTTCTGTAACCGTTCGTCGTGGGACTCTACAGTCTCGACTGATTACAGAAAAAGCTCCGGATGTTCTGACTACCGAAACAAAAGGTCAGGAAAAACGTGCCGAGAACATGGAAAGTGTTCGTTTCTTCGATCTTGATATTAACGAATTTCGTACTTTCCGTATGGATGATCTCGTTTCTCTGGGCGGTAATAAACCAGAAGACCTGATTAAATTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
076281a94510ae55cb0378ffd2ba432a5d1034bdccdb2a72754fa3657e1aca86
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage S13 Kim,Y., Shin,H. and Ryu,S. 2012-06 — GenBank