Protein

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Genbank accession
WNA15982.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSLSINHPLGRVSSTTALSFEVQGGSATAPKNINLSASSVIMPNVQQPVGTSGAMIFDASTKRMKYYDGTQWISWLPSTEITDPIETDLTDIRNKLNTKIDSVIYSSSAVPTASISGTTLYINFPTGGASSNTTPGLFTSLPTGSISHYALVSGQTPASVREQLGGSVGSQNGRDGTQASPFITSTGWTFADGLYWQWNGPNGTVVTKVPNLNQNAYMKGMSTSGITKSDTPIASSGSISGTSLTISQLPAHNFTVSGTTSFGGGHIHKTTWNPMGWSGTSNVKDGRGVTSGSGSLDTEYAGDHSHTFSATTNTVGSGLSHSHALQDVDVAHFNVAVLWNMATPSLALNQAAGDARYVLKSGDTMTGSLTIASSAVLRGDDSNLVFWFRNSANTERAVIYHNGSTLRFRSNGGNEMSLSNSGLLTAPQISTPGTVTASQLTSNGNANIAGTLNANVLAANQVTSNGNANVAGTTTSGSVVTNQLVSYNTLQVNGSATTGPLQVNGTANTGTLNVNGQITATGDIWAFSDERLKENIKPIVNAKETLSQITGIIGNMIEDETKTEKSMVIAQQIKAVFPQAVSTDENGYLKVNYIALIPLLIAGYNELLKGDK
Physico‐chemical
properties
protein length:612 AA
molecular weight: 63863,04310 Da
isoelectric point:6,12147
aromaticity:0,06373
hydropathy:-0,18235

Domains

Domains [InterPro]
DC_1176
STR
5–611
DC_1176
IPR030392
CHP
528–612
IPR030392
IPR030392
CHP
528–581
IPR030392
WNA15982.1
1 612
Architecture
STR
STR 5-612
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNA15982.1
1 612
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,9650
Central domain 26 224 200 0,0779
C-terminal 225 612 387 0,8999
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-224
C-terminal
225-612

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XaC1
[NCBI] 		3073039 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNA15982.1 [NCBI]
Genbank nucleotide accession
OR258281.1 [NCBI]
CDS location
range 221795 -> 223633
strand +
CDS
ATGAGTTTAAGTATTAATCATCCACTTGGTAGAGTAAGTAGTACTACTGCTTTATCATTTGAGGTACAGGGCGGCAGTGCGACTGCACCTAAGAACATAAACTTGTCTGCTTCATCCGTCATAATGCCGAACGTTCAGCAACCAGTAGGTACATCTGGTGCAATGATATTCGATGCAAGTACTAAACGAATGAAGTACTATGATGGTACTCAATGGATTTCTTGGTTACCAAGTACTGAAATTACAGATCCTATTGAGACAGATTTAACAGACATTAGAAATAAATTAAACACTAAAATTGACTCAGTAATTTACAGCAGTTCTGCTGTTCCTACTGCCAGTATTAGTGGAACTACACTTTATATTAACTTCCCTACTGGTGGTGCTAGTTCTAATACCACTCCTGGATTATTCACATCTCTACCTACTGGTAGTATCAGTCATTATGCATTAGTTTCTGGTCAAACTCCAGCCAGTGTTCGTGAACAATTAGGTGGTTCAGTTGGTTCACAAAATGGCAGAGATGGTACTCAAGCTTCTCCGTTTATCACAAGTACTGGTTGGACTTTCGCTGATGGTTTATACTGGCAGTGGAATGGACCTAATGGAACTGTGGTAACAAAAGTACCTAATCTAAATCAGAATGCTTATATGAAAGGTATGAGTACTTCAGGTATTACTAAATCAGATACTCCAATTGCAAGTTCTGGTAGCATTAGTGGAACTTCACTAACTATTTCACAATTACCTGCACATAACTTTACCGTAAGTGGAACTACTAGTTTTGGTGGTGGTCATATACATAAAACTACATGGAATCCGATGGGATGGAGTGGTACTTCCAATGTTAAAGATGGTCGTGGTGTAACTTCCGGTAGTGGTTCTTTAGATACTGAATATGCTGGTGATCACAGTCATACTTTTAGTGCAACTACTAATACCGTAGGTTCTGGCTTATCACATAGTCACGCATTACAAGATGTAGATGTTGCACACTTTAATGTTGCAGTACTTTGGAATATGGCAACACCATCTTTAGCATTAAACCAAGCAGCAGGTGATGCACGATACGTTCTAAAATCCGGTGACACTATGACCGGCTCACTTACTATTGCTAGTTCTGCTGTATTACGTGGTGATGACAGTAACCTTGTATTCTGGTTCCGAAATAGTGCAAATACCGAAAGAGCAGTAATATATCATAATGGTAGTACATTACGTTTCCGTTCAAACGGTGGTAATGAAATGTCATTGAGTAATAGTGGACTATTAACTGCACCTCAGATTTCCACTCCCGGTACAGTAACAGCTAGTCAGTTAACAAGTAATGGTAATGCAAATATTGCGGGTACTTTAAATGCTAACGTTCTTGCTGCAAACCAAGTAACAAGTAATGGTAATGCTAATGTTGCAGGGACTACTACTTCTGGTTCGGTGGTTACTAACCAGCTTGTTAGTTATAATACTTTACAGGTAAATGGTTCAGCAACAACTGGTCCACTACAGGTAAACGGTACTGCAAATACTGGTACTCTAAATGTAAACGGCCAAATTACTGCTACTGGTGATATTTGGGCTTTCTCTGATGAAAGACTAAAAGAAAATATCAAACCTATTGTTAATGCAAAAGAAACTCTTTCTCAGATTACTGGTATCATTGGTAATATGATTGAAGACGAAACTAAAACTGAAAAGTCAATGGTTATTGCACAGCAGATCAAGGCGGTGTTCCCTCAAGCAGTTAGTACTGATGAAAATGGTTACTTAAAAGTTAACTACATTGCATTAATCCCACTATTAATTGCTGGATATAATGAGCTATTGAAAGGGGATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e6474ebba86e92638c0ba1cd5c29b8a343fa0a70f6360ea543dc80d776290c08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi,L.M., Villicana,M.C., Amarillas,L.A., Carrillo,A. and Leon,J. 2014-03-01 — GenBank