Protein

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Genbank accession
YP_009208722.1 [GenBank]
Protein name
appendage
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNSQNPFPGGDSCCGTNYDMTVDQLLGNAYQVVKFVAMRMPFIKTVSDNIDHVIAIATALDKLKELEAKLPELLALREKLAELMELYTHLNDLLLISSNMPQILTVHDNLPQINAIYDNLSKVQTVAADITKIVTVADNINAVKNLDANMAAILNVNNNLTVVKNVSDNMADVRNVSTNMVAVKGVNDNMAEILAVFAKLDELTNINNKLDNLTTDDISYTRPENGAIKQTLTARLKNEVWLSDFTGYDPTGATASNAAFTAAIAALPRGGVVEIPMGARLLLTQELEANQPVLLRGAVRGDVSASTNGSNQSVPVIVWGGAADKTMFTLKAATAGSVIFGGGSVGIEWDGAALAATAVHLNNTIEAEFRGKTRNFRADSVLVSSLNGSTGNFSQRNKIDLDYIWGVAAACENGNGVRLMGNGTNVPGTQHQLGVISGLVMHGSMVVISETDNCYAEFVNSAIQAGGTGSAVVLLSGGAQPANHNLFNHVAGQVKMEQGIFGTKIFHFVSEGGGITRVSGSSRWDGELTDYATGRVYASHKYQLRKRIQVTSSELALVDSASSAKFALLWETPVLPKAQPGPALHTMIPPDYDMSNGKIEGVEIFYGTNGTAVGDYRVRVRLSTGAVGSTLVTPDFEGIAPLVAVDQHVMGSFKLATDVAVTRGDIMALVLQRMSSDGGDTSSNDLHILGVRLHYVSSGPDTPGSGDYYIPDWD
Physico‐chemical
properties
protein length:714 AA
molecular weight: 75994,13040 Da
isoelectric point:5,15941
aromaticity:0,06162
hydropathy:0,00098

Domains

Domains [InterPro]
DC_0265
STR
1–685
DC_0265
Coil
Unmapped
56–93
Coil IPR012334
YP_009208722.1
1 714
Architecture
STR
STR 1-685 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009208722.1
1 714
Domain Start End Length (AA) Confidence
N-terminal 1 256 256 0,9213
Central domain 257 527 272 0,9833
C-terminal 528 714 186 0,9873
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-256
Central
257-527
C-terminal
528-714

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage phiAxp-3
[NCBI] 		1664247 Uroviricota > Caudoviricetes > Schitoviridae > Dongdastvirus > Dongdastvirus Axp3
Host Achromobacter xylosoxidans
[NCBI] 		85698 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009208722.1 [NCBI]
Genbank nucleotide accession
NC_028908 [NCBI]
CDS location
range 64462 -> 66606
strand -
CDS
ATGAACTCCCAGAATCCGTTCCCCGGTGGTGATAGCTGCTGCGGAACCAATTACGACATGACGGTGGACCAACTGCTGGGCAACGCCTATCAGGTGGTCAAGTTCGTCGCCATGCGTATGCCGTTCATCAAGACGGTCAGCGATAACATCGACCATGTGATCGCCATCGCCACTGCACTGGACAAGCTGAAGGAACTGGAAGCCAAGCTTCCGGAACTGTTGGCTCTTCGTGAGAAGCTGGCTGAACTGATGGAGTTGTACACGCATCTGAACGACCTGTTGCTGATTTCCAGCAACATGCCTCAGATTCTGACGGTGCATGACAACCTGCCCCAGATCAACGCCATCTATGACAATCTGTCGAAGGTGCAGACTGTTGCCGCCGATATCACCAAGATCGTCACGGTTGCTGACAACATCAACGCCGTGAAGAACTTGGACGCCAATATGGCGGCCATCCTGAACGTGAACAACAACCTGACGGTTGTGAAAAACGTTTCGGACAATATGGCCGATGTGCGCAACGTCAGCACCAATATGGTGGCGGTGAAGGGCGTCAACGACAACATGGCAGAAATCCTGGCTGTGTTTGCCAAGCTGGATGAGTTGACCAACATCAACAACAAGCTGGACAACCTGACCACGGATGACATTTCGTACACCCGTCCGGAAAACGGTGCGATCAAGCAGACTCTGACTGCCCGGCTGAAGAATGAAGTCTGGCTGTCCGACTTCACTGGCTATGATCCCACTGGCGCTACCGCAAGCAATGCTGCATTCACGGCGGCAATTGCTGCTCTTCCGCGTGGTGGTGTCGTGGAAATTCCCATGGGTGCTCGTCTCCTTCTGACCCAGGAACTCGAAGCCAATCAGCCGGTGCTTCTGCGTGGTGCTGTTCGTGGGGACGTTTCGGCAAGCACCAACGGCAGCAACCAGAGTGTTCCTGTGATCGTCTGGGGAGGTGCTGCGGACAAGACCATGTTCACCCTCAAGGCTGCTACTGCTGGCTCCGTCATCTTCGGTGGCGGCTCCGTCGGTATCGAGTGGGATGGTGCTGCGCTGGCTGCAACTGCTGTTCACCTGAACAACACCATTGAAGCGGAGTTCCGTGGCAAGACCCGGAACTTCCGAGCAGACAGCGTCTTGGTTTCGTCCCTGAACGGCTCCACCGGCAATTTCTCGCAACGCAACAAGATCGACCTGGATTACATCTGGGGCGTGGCTGCTGCCTGCGAAAATGGCAACGGTGTTCGCCTGATGGGCAACGGCACTAACGTACCGGGAACCCAACACCAGCTTGGTGTCATCTCGGGACTCGTCATGCATGGTTCCATGGTGGTCATCTCGGAAACGGACAACTGCTATGCTGAATTCGTCAACTCGGCCATCCAAGCTGGCGGCACTGGTTCCGCTGTTGTCTTGCTGAGTGGCGGTGCCCAACCTGCCAACCACAACCTCTTCAACCACGTCGCAGGACAGGTGAAGATGGAACAAGGCATTTTCGGTACGAAAATCTTCCATTTCGTGTCGGAAGGCGGGGGCATTACCCGTGTCTCTGGTTCCTCCCGCTGGGACGGCGAACTCACGGATTACGCCACTGGCCGTGTGTATGCCTCCCACAAGTACCAGTTGCGTAAGCGAATCCAGGTCACTTCTTCTGAACTGGCTCTGGTGGATTCGGCTTCGTCCGCTAAGTTCGCACTCCTGTGGGAAACCCCGGTGCTCCCCAAGGCACAGCCGGGACCTGCCCTGCACACCATGATTCCGCCGGACTACGATATGTCCAATGGCAAGATCGAAGGTGTGGAGATTTTCTACGGCACGAATGGCACCGCAGTGGGTGATTATCGTGTGCGTGTTCGTCTCTCCACTGGGGCAGTCGGTAGTACGTTGGTTACCCCTGATTTTGAGGGTATCGCCCCCTTGGTGGCTGTTGACCAACACGTTATGGGTTCCTTCAAGCTGGCAACGGATGTTGCAGTGACCCGGGGGGACATCATGGCTCTCGTACTGCAACGCATGTCGTCGGACGGTGGGGACACTAGCAGTAATGATCTCCACATTCTGGGTGTTCGTCTTCACTACGTATCCAGCGGACCTGATACCCCGGGGTCGGGTGACTATTACATCCCGGACTGGGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5567aeccafe84810d3a776dcb0204e1a37402a077a568ce797ab19dc43c8473f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7397
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50