Protein

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Genbank accession
AYN55980.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MKKILDSAREYLRTNNKIKTACLITLELPSSTGSSSAYIYLTDYFRDVIYNGILYTSGKVKSITTHKQNRKLSIGSLSFTITGTAEDEVLKLVQNGVSFLDRSISIHQAVIDEEGNILPVDPDTNGPLLYFRGKITGGGIKDNIGTSGISTSIITWNCSNQFYDFDRVNGRFTDDADHRGLEIVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFLPVVYGVQKIPGIPVFADTELHNPNIVYVVYAFCEGEIDGFLDFYFGDVPMICIDPNDSKSRTCFGTKKVAGDTMQRIASGQPSSEPSVHGQEYKYNDGNGDIRIWTYHGKADQSAADVLVNIAKEKGFYLQNMNENGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEVSAEVQGKKIKIYHSDGRVTADKTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDAVGENRQIVQMNTILDTSESVFKNVQGLIESYGGAINNLSGQYRITVEKFSNTPLEIDFLDTYGDLELSDTTGRNKFNSVQASILDPALSWKTNSITFFNSIFKEQDKGLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLTFSLPYHFIGIEPNDPIAFTYGRYGWVKKYFLVDEVENSREGKINITLQEYGEDVFINSEQVDNSGNDIPDVSNNVLPPRDFMYTPTPGGQVGSIGKNGELSWLPSLTNNVVYYSIVHSGHADPYIVQQLETNPNLQMIQEIIGEPAGLAVFEIRAVDINGRRSSPVTLSVELNSAKNLSVVSNFRVTNTASGDASEFVGPDVKLAWDRIPEEDIIDGIFYTLEIYDNLDRLLRSVRIEDQYVYDYLLIYNKADYALHNEDALGINRKLRFRIRAEGDNGEQSVDWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107172,68170 Da
isoelectric point:5,03033
aromaticity:0,11275
hydropathy:-0,39315

Domains

Domains [InterPro]
DC_0187
STR
229–948
DC_0187
IPR032876
ATT
594–682
IPR032876
AYN55980.1
1 949
Architecture
STR
ATT
STR
STR 229-593 | ATT 594-682 | STR 683-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYN55980.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9499
Central domain 313 525 214 0,2985
C-terminal 526 949 423 0,0043
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-525
C-terminal
526-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STG2
[NCBI] 		2480623 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus STG2
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYN55980.1 [NCBI]
Genbank nucleotide accession
MK005300.1 [NCBI]
CDS location
range 15084 -> 17933
strand +
CDS
ATGAAGAAAATTCTTGACAGTGCAAGAGAGTATTTAAGAACTAATAATAAAATAAAAACTGCATGCCTTATTACTCTTGAATTGCCAAGCTCTACCGGATCAAGTTCTGCATACATTTATCTTACAGACTATTTTAGAGATGTAATTTATAATGGTATTCTTTACACATCCGGTAAAGTTAAGTCTATAACAACACATAAACAAAATAGAAAACTTTCCATTGGTAGCCTTTCTTTTACTATCACAGGTACTGCTGAGGATGAAGTGTTAAAACTAGTCCAAAATGGTGTATCCTTCCTAGATAGATCTATTTCAATCCATCAAGCGGTTATTGATGAAGAAGGTAACATTCTTCCTGTAGATCCAGACACTAATGGTCCTTTACTTTACTTCCGTGGTAAAATCACTGGTGGTGGTATTAAGGATAACATTGGTACTTCTGGAATCAGCACATCTATTATTACATGGAACTGTTCAAACCAATTCTATGACTTTGATAGAGTAAATGGACGCTTCACAGATGATGCTGACCATAGGGGACTTGAGATTGTTGCTGGCCAATTAGTTCCCTCTAATGGTGCTAAGAGACCTGAATATCAAGAGGACTACGGATTCTTTCACGCTAACAAGAGTATTTCTATTCTTGCTAAGTATCAGGTACAGGAAGAACGTTATAAGTTACAATCTAAAAAGAAATTATTTGGTCTTTCTAGAAGCTATAGTCTAAAGAAATACTATGAGACTGTAACTAAGGAAGTAGACCTTGATTTTAACTTAGCTGCTAAATTCCTGCCAGTAGTATATGGAGTTCAAAAAATTCCTGGAATCCCAGTATTTGCAGATACTGAACTGCATAATCCTAATATCGTATATGTAGTGTACGCCTTCTGTGAGGGTGAGATTGATGGATTCCTAGATTTCTACTTTGGTGATGTACCAATGATCTGTATTGATCCTAATGATAGTAAGTCTCGTACTTGCTTTGGTACTAAGAAAGTAGCTGGTGATACCATGCAACGTATTGCTTCTGGTCAACCAAGCTCTGAACCTTCTGTTCATGGACAGGAATATAAGTATAATGATGGTAATGGCGATATCCGTATCTGGACTTATCATGGTAAGGCTGATCAATCTGCTGCTGATGTTCTAGTTAACATTGCAAAAGAGAAAGGTTTCTATTTACAGAACATGAATGAGAATGGACCGGAATACTGGGACTCTCGTTATAAACTGTTAGATACTGCTTATGCTATCGTTCGCTTTACTATTAATGAAAACAGAACAGAAATCCCAGAAGTTAGTGCTGAAGTTCAAGGTAAGAAGATTAAGATCTATCATTCAGATGGTAGAGTAACTGCTGATAAGACTAGCTTAAATGGTATCTGGCAAACTCTGGACTACCTAACCTCTGATCGCTATGGTGCTAATATCACTATTGATCAGTTCCCTCTCCAGCAACTTATTCAAGAAGCAGCTATTCTGGATATCATTGATGAATCCTATCAGGTTTCTTGGCAACCCTATTGGAGATACGTTGGATGGACTGATGCTGTAGGAGAGAATAGACAAATAGTTCAAATGAACACTATTCTTGATACCTCTGAGTCAGTATTTAAAAACGTGCAGGGATTAATAGAGTCTTATGGTGGTGCTATCAACAACTTATCTGGACAGTATAGAATAACTGTTGAGAAGTTCTCAAACACCCCATTAGAGATTGACTTCTTAGATACCTATGGTGATCTGGAGCTATCAGATACTACGGGAAGAAATAAATTCAACTCAGTACAAGCCTCCATATTAGACCCTGCATTAAGCTGGAAAACTAACTCCATTACATTCTTTAACTCTATATTTAAGGAACAAGATAAAGGGTTAGATAAAAAACTTCAGCTTTCTTTTGCAAACATCACTAACTACTATACTGCACGTAGCTTTGCAGATAGAGAACTGAAAAAGTCTCGTTACTCACGAACTCTCACATTCTCACTACCATATCATTTCATAGGCATTGAGCCTAACGATCCGATTGCTTTTACATATGGTCGTTATGGTTGGGTTAAGAAATACTTTCTAGTTGATGAAGTTGAAAACTCTAGAGAAGGTAAGATTAATATTACACTGCAAGAGTATGGTGAGGATGTATTCATTAACTCCGAGCAGGTTGATAATAGTGGTAACGATATCCCTGATGTTAGTAATAACGTACTGCCTCCTAGAGACTTTATGTACACACCAACACCGGGTGGACAAGTAGGATCTATTGGTAAGAATGGTGAGTTATCTTGGCTTCCTAGCTTAACTAATAATGTTGTTTATTACTCCATCGTTCACTCAGGGCATGCTGATCCTTATATCGTACAGCAACTAGAAACTAATCCAAATCTACAAATGATCCAAGAAATTATTGGAGAACCTGCTGGTTTAGCAGTCTTTGAGATTAGAGCTGTAGATATTAACGGTAGACGAAGTTCTCCTGTAACATTATCGGTAGAACTTAACTCTGCTAAAAACTTAAGCGTCGTTAGTAATTTCAGGGTTACTAACACAGCTTCAGGAGATGCATCGGAGTTTGTAGGACCAGACGTTAAGTTGGCCTGGGATAGAATTCCAGAAGAAGATATCATTGATGGAATCTTCTACACTCTCGAAATCTACGATAATCTAGATCGTTTATTAAGAAGTGTACGAATTGAAGATCAGTATGTCTACGATTATCTACTGATATACAATAAGGCAGACTATGCTCTTCATAACGAGGATGCTCTAGGTATTAACAGGAAGTTACGCTTCCGTATAAGAGCAGAAGGTGATAATGGCGAGCAATCTGTGGATTGGGCATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5ea99a6f6b38804a758eaaaf20e96ee5425b6453faedfdd515650b38ecfd52d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8198
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage control of Salmonella Duc,H.M. 2021-06-07 — GenBank