Protein

View in Explore
Genbank accession
QTD79403.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MANVQTRPDNTIFAESALTGEVTEFQNLARGWGSTLTYSAGIPPMEWFNFIGQRSDKGIHYILQQGVDQWNATETYPVGALVKVLADNCLYKALTQNLNKEPKANGNDWVKVLDVTAASAAARQVGRNTGNVVQIGAFGIGSTAEQITNADSPTQSGFYGLPATGAGNPVSGQASEIIHIQYDANNATQYAKGINKRTIYTRDQVNGTWTAWEGQYGPSNKPTAQELGINQDFIPMDGSESIRGNLGTVGWVHIARTTSDLLRAANSSGVGVAEIVGNVAGGLAVQHRLTSVSVAANSHTAFLGMWGSVAMTSIKQVLQSNGSTRFDLDVCRPGSVADRRVTGAQLDGANSRFTTTNGFTLQENGVRVYSPNNPQPVDVSWAVRRVRLGSEVRNNRNGSESFVLRMPAGHMATGFDIHSKGGREDEFNAVFSRPIQMNINDVWYTVDQL
Physico‐chemical
properties
protein length:449 AA
molecular weight: 48362,16490 Da
isoelectric point:6,40009
aromaticity:0,08018
hydropathy:-0,33363

Domains

Domains [InterPro]
DC_0043
STR
1–448
DC_0043
cd19958
STR
148–213
cd19958
QTD79403.1
1 449
Architecture
STR
STR 1-448 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_fHy-Eco03
[NCBI] 		2815753 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTD79403.1 [NCBI]
Genbank nucleotide accession
MW602648 [NCBI]
CDS location
range 29750 -> 31099
strand +
CDS
ATGGCTAACGTACAAACTCGCCCGGACAATACTATCTTTGCGGAAAGCGCATTGACGGGTGAAGTAACTGAATTCCAGAACCTTGCTCGTGGTTGGGGTTCTACCCTTACATATTCAGCGGGTATTCCGCCTATGGAGTGGTTTAACTTCATCGGCCAGCGTTCTGATAAGGGTATTCACTATATCCTGCAGCAGGGTGTGGACCAGTGGAATGCCACTGAGACCTACCCTGTTGGGGCACTTGTTAAAGTTCTTGCCGATAACTGCCTTTATAAGGCGCTTACTCAGAACCTTAACAAAGAACCAAAAGCTAACGGTAACGACTGGGTTAAAGTTCTGGACGTTACAGCCGCATCTGCTGCTGCACGTCAGGTAGGTCGTAACACTGGTAATGTTGTACAGATTGGTGCATTTGGTATTGGTTCTACAGCTGAACAGATTACCAATGCTGATTCACCAACTCAGTCTGGTTTTTACGGTTTACCAGCTACGGGTGCAGGTAACCCTGTATCTGGTCAGGCATCTGAGATTATCCATATTCAATATGATGCTAACAACGCTACTCAGTACGCTAAAGGTATCAATAAGCGTACCATCTATACTCGTGACCAAGTAAACGGTACTTGGACCGCATGGGAAGGTCAGTATGGCCCGAGCAACAAACCAACTGCGCAAGAGCTTGGCATCAACCAGGACTTTATACCGATGGATGGCTCTGAGTCAATCCGTGGTAACCTCGGTACTGTGGGCTGGGTTCATATTGCTCGCACTACGTCCGACCTATTGCGCGCTGCTAATAGCAGCGGTGTTGGTGTTGCCGAAATTGTTGGTAACGTTGCTGGAGGACTGGCCGTACAGCACCGACTGACATCTGTGTCGGTAGCAGCAAACTCTCATACAGCTTTCCTGGGTATGTGGGGTTCCGTTGCAATGACCAGCATTAAGCAGGTACTGCAATCCAATGGTTCAACAAGATTTGACCTGGATGTATGCCGTCCTGGTTCAGTAGCTGACCGCCGTGTTACTGGTGCACAACTGGATGGTGCTAATAGCCGATTCACCACAACAAACGGCTTTACTTTGCAGGAAAACGGTGTTAGAGTATATTCACCTAACAACCCACAACCTGTGGATGTTTCCTGGGCCGTTCGTCGGGTTCGTCTTGGCAGTGAAGTTCGTAACAACCGTAACGGCAGTGAGTCGTTTGTACTCCGCATGCCAGCCGGTCACATGGCAACTGGTTTTGATATTCACTCTAAAGGCGGTCGTGAGGATGAGTTCAATGCCGTATTCTCTCGCCCAATTCAGATGAACATTAACGATGTATGGTATACGGTGGACCAACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd2cc111d790f1ff9ef00460ff8441958cad1d742203ab7872e1693d24532d1e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening of bacteriophage encoded toxic proteins with an NGS based assay Kasurinen,J., Spruit,C.M., Wicklund,A., Pajunen,M.I. and Skurnik,M. 2021-04-24 — GenBank