Protein

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Genbank accession
AVO24147.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MADLPEQPAGWPGIPMISTSDPVLGGQDGPANRQAAALISRLQAVRDLVDAATAALATVTPQVDQHVQTINALQASVSSVQTSVQTVSGVATAAQAAASVADAKAVAAQTAATAKAVRIDLGTVTVTYTASTALVAGARSIAVACTGAQVGDAIFVAATNAIPDGYAVGAAQCLVADTIRVSVIYPALSIGNSFSISLRVFALR
Physico‐chemical
properties
protein length:204 AA
molecular weight: 20297,81720 Da
isoelectric point:5,09274
aromaticity:0,03431
hydropathy:0,52255

Domains

Domains [InterPro]
DC_1388
STR
1–202
DC_1388
AVO24147.1
1 204
Architecture
STR
STR 1-202 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XPP9
[NCBI] 		2099859 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVO24147.1 [NCBI]
Genbank nucleotide accession
MG944233 [NCBI]
CDS location
range 36801 -> 37415
strand +
CDS
ATGGCCGATCTGCCCGAACAACCTGCCGGCTGGCCCGGTATCCCGATGATATCGACGTCCGACCCGGTCCTAGGCGGTCAAGACGGGCCCGCCAATCGACAAGCTGCGGCGCTGATCTCGCGCTTACAGGCGGTACGCGATCTCGTCGACGCAGCCACCGCCGCGCTCGCAACGGTGACCCCGCAGGTCGACCAGCACGTCCAGACGATCAACGCTCTGCAAGCCTCTGTCAGTTCCGTACAGACGTCCGTGCAGACGGTCAGTGGGGTTGCCACGGCGGCCCAGGCCGCGGCCTCTGTGGCCGACGCTAAGGCCGTTGCCGCGCAAACGGCAGCCACGGCAAAGGCGGTGCGCATCGACCTGGGCACTGTCACGGTCACCTACACTGCGAGCACCGCACTGGTGGCTGGCGCACGTTCGATTGCGGTCGCGTGCACCGGGGCTCAGGTCGGCGACGCGATCTTCGTCGCGGCGACCAACGCGATACCGGACGGCTACGCGGTCGGCGCGGCGCAATGTCTGGTCGCCGACACGATCCGCGTATCGGTGATCTACCCTGCGCTGAGCATCGGCAATAGCTTCAGCATCTCCTTGCGTGTCTTTGCGCTGCGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
64ee026b88a6e9cf4809c1fdc2385e15089e2025f4e0bb8cd71a58d1ea2c154c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and comparative genomics of Xanthomonas oryzae pv. oryzae bacteriophages Varga,I., Molnar,J., Gazdag,A., Szucs,D., Doffkay,Z., Valappil,S.K., Papp,S., Pinter,R., Vera Cruz,C.M., Ricardo,O., Vizi,T., Schneider,G., Rakhely,G. and Kovacs,T. 2019-07-03 — GenBank